Nannospalax galili (Upper Galilee mountains blind mole rat): 103743580
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Entry
103743580 CDS
T03372
Symbol
Wrn
Name
(RefSeq) Werner syndrome RecQ like helicase
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngi03032
]
103743580 (Wrn)
03400 DNA repair and recombination proteins [BR:
ngi03400
]
103743580 (Wrn)
Enzymes [BR:
ngi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103743580 (Wrn)
DNA replication proteins [BR:
ngi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103743580 (Wrn)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
103743580 (Wrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
103743580
NCBI-ProteinID:
XP_008843156
LinkDB
All DBs
Position
Un
AA seq
1444 aa
AA seq
DB search
MSENKMEPTSLQRKFPEWMSVQNNRYATKERKACIQKSALEDGLPFLEFTGSVVYSYEAS
DCSFLSEDISRHLSQGDVIGFDMEWPPVYTKGKLSRVALIQLCVSESKCYLFHISSMSVF
PQGLKILLENKAIKKAGVGIEGDQWKLLRDFNIKLESFVELTDVANEKLNCTETWSLNGL
AKHILGKQLLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLMIYQRLESLGDAGQVFAIN
KVEEFLPSEMKKQLNSISEEARDLAKHFPDTCRKLENPRSVSKILKTISENLYSLKKVIL
DPTNIENKLKPGSSFNLSSDHPAVIGEQQKQIGEHRTFTTVKEEAWDPTFDNSVKHNGVD
VFGNKVKQEEGEFEDGVEDNLLKENMEGTCLMSLDISEYELQILEQQAERKTCNDTSSQS
AEHLPPNNDEKDSSYIIESDEDFEMEMLKSLENLNSGIVEPTHSKWLEMESNVSLPTEEE
DEDKIEAIEEEEEDEDHLLPEPNAKQVICLKTYFGHCSFKPVQWKVIHSVLEERRDNVVV
MATGYGKSLCFQYPPVYAGKVGIVISPLISLMEDQVLQLEMSNIPACFLGSAQSENVLGD
IKLGKYRIVYITPEFCSGNLDLLQQLEADIGITLIAVDEAHCISEWGHDFRSSFRKLGFL
KVVLPLVPIVALSATASSSVREDIVHCLNLKNPQITCTSFDRPNLYLEVGRKTGNILQDL
KPFLVKKPSSAWEFEGPTIIYCPSRKITEQVTAELWNLKLACGTYHAGMSSRARRDVHHR
FMRDEIQCVIATIAFGMGINKADIRRVIHYGAPKEMESYYQEIGRAGRDGLPSSCYLLWS
PADFNITRHHLFEIHDENFRLYKLKMMAEMEKYLHSSRCRRQIILSHFEDKRLQKASLGI
RGTEQCCDNCRFRLNRCYSIYESEDTSQDFGPQAFQLLSAIDVLQEKFGIGVPILLLRGS
NSQRLGDKYHSHKLFGIGKDRAESWWKALSHCLITEGFLVEVPCQNKFIKTCSLTKQGRK
WLDEARTQSPPRLILQASEEMLPRKDLQPSSNPVSSDTAQHSSNRIPTELTSEKSNLARM
YSYKAPEKFSSGSNSVMMKSPGKTYDSSEPIISFQEQETQTVLYAKLVEARQKHANKMDV
PPAILATNKILLDMAKMRPTTVENVKQIDGVSEGQAVVLAPLLEAIKHFCQVNSVQTDLF
SSTKPREEQKSQEMENDKCSLSKSVAVTYSLFQEKKLTLQNVAENRILPLTAVGMHLAQA
VKAGYPLDLERAGLTPEVQKIIADVIRNPPINSDMYKVKLIRMLVPENIDTYLIHMAIEC
FESDPDSRSQPSCGSNRKRYFSSSEESCSSAKRNKEVVVTDNKADGTHPDSFSLKDKGCR
DSLSSWNQPPDDPDMEDLFSDSNPQTSSEISKRKLPVWFVKGEETLADISEKSMTRTKKK
GLFG
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaataaaatggaaccaacttcactgcagaggaaatttcctgaatggatgtct
gtgcagaataatagatatgctacaaaagaaagaaaggcatgcattcagaagagtgcttta
gaagatggcctcccatttttagaattcactggatctgttgtttacagttatgaggctagt
gattgctctttcctctctgaagatattagtaggcatctgtctcagggagatgtgatagga
tttgacatggaatggccccccgtatacactaaagggaagctgagcagagttgcattgatt
cagttgtgtgtgtcggagagcaaatgttacttgtttcatatttcttctatgtcagtattc
ccacagggattaaaaattttacttgaaaataaagcaattaagaaggcaggtgttggaatt
gaaggagatcagtggaaacttctacgtgactttaatatcaagttggagagttttgtggag
ttgacagatgttgccaatgaaaagctgaactgtacagagacctggagcctcaatggtctg
gctaaacacatcttaggaaaacagcttctgaaagacaagtccattcgctgtagcaattgg
agtaattttcccctcactgaggaccagaaactgtatgcagctactgatgcttatgctggt
cttatgatttatcaaagattagaaagtttgggagatgctggacaagtgtttgctataaat
aaagtagaggaattcctacctagtgagatgaagaaacagctgaattcaatctctgaagaa
gcgagggatctggctaagcatttccccgatacttgcagaaaattggaaaatcctaggagt
gtttctaaaatattgaagactatttcagaaaatctatattcactgaagaaggtgatactt
gaccctacaaacattgagaataaactgaagccgggcagttcttttaacttgtcatcagac
catccagctgtgattggagaacagcaaaagcaaattggagaacataggacttttactaca
gttaaagaggaggcatgggaccccacatttgataattcagttaaacacaatggagttgat
gtatttgggaataaagtgaagcaggaagaaggtgaatttgaagatggagtagaagacaat
ctgttgaaagaaaatatggagggaacttgtttgatgtcattagatatttcagaatatgaa
ctccaaattttggaacaacaggctgaaagaaaaacttgcaatgatacatcttctcaatct
gctgagcatttacctcccaacaatgatgaaaaagattcatcttatataattgaaagtgat
gaagattttgaaatggagatgcttaagtctttagaaaacctaaatagtggcatagtagaa
ccaactcattctaaatggttagaaatggaaagcaatgtaagtcttcctactgaggaagaa
gatgaagataaaattgaagccattgaagaggaggaggaagatgaggaccatttattgcca
gaacctaatgcaaagcaagttatttgtctcaagacctactttggccactgcagttttaaa
ccggttcagtggaaagttattcactctgtattggaagaaagaagagataatgttgttgtc
atggcaactggatatggaaagagtttgtgcttccagtacccacctgtttatgcaggcaag
gtcggcattgttatttctcctcttatttctttgatggaagaccaagttctgcagcttgaa
atgtccaacattccagcttgtttccttggatcagcacagtcagaaaatgttctaggagat
attaaattagggaaatacaggattgtatacataactccagaattctgttctggtaacttg
gacttactccagcaacttgaggctgatattggcattacactcattgctgtggatgaggct
cactgtatttctgagtggggccatgatttcagaagttcattcaggaagttgggcttcctg
aaggtagtgcttccattggttccaattgttgcactctctgcaactgcaagttcctctgtc
cgggaagacattgtacactgcttaaacctgaaaaaccctcagattacctgcacaagtttt
gatcgaccaaatctatatttagaagttggacgaaaaacagggaatatccttcaggatcta
aagccatttcttgtaaagaaaccaagttctgcctgggaatttgaaggtccaactatcatc
tattgtccttccagaaaaataacagaacaagttactgctgaactttggaatctgaaatta
gcctgtggaacataccatgcaggcatgagtagtcgtgcaaggagagatgttcatcataga
ttcatgagagatgaaattcagtgtgtcatagctactatagcttttggaatgggcattaat
aaagctgacattcgcagagttattcattatggtgctcctaaggaaatggaatcatattac
caggaaattggtagagctggccgtgatggacttccaagttcttgttacttactctggtct
ccagcagactttaacataactaggcatcacctttttgagatacatgatgaaaattttcga
ttgtacaaattaaagatgatggcagagatggaaaaataccttcattccagcagatgtagg
cgacaaatcatcttgtctcattttgaggacaaaaggctacaaaaggcctccttgggcatt
aggggaactgaacaatgttgtgataattgcaggttcagattgaatcgttgctattccatt
tatgagtcagaggacacatcacaggactttggtccacaagcattccagctcctgtctgct
atagatgtcctacaggagaagtttggaattggggttccaattttacttctccgaggatct
aattctcagcgtcttggagataaatatcacagtcacaagctttttggtataggcaaggat
cgagcagaaagttggtggaaggccctttcccattgtctcataactgaaggattcttagta
gaagttccttgtcaaaacaaatttataaagacttgctcccttacaaaacagggtagaaag
tggcttgatgaagcccgtacacagtctcctccaagacttatccttcaagcgagtgaagaa
atgcttccaaggaaggatcttcagccaagttctaaccctgtgtcttcagacactgcacag
cattcctctaatcgaataccaactgaattaacttcagagaagtctaatttggcaaggatg
tattcttacaaagcacctgagaaattttcttctgggagtaacagtgtcatgatgaaatca
ccaggaaaaacttatgattcctcagaacctattatttcattccaagagcaggagacccag
actgtgctgtatgccaaattggtagaagctaggcagaaacatgccaataaaatggatgtt
cctccagctatcctggcaacaaataagatactgctggatatggccaaaatgagaccaaca
actgttgaaaatgtgaaacagattgatggtgtctctgaaggccaagctgtggtgttagcc
cctttgttggaagccatcaaacatttttgccaagtaaatagtgttcagacagacctcttt
tcaagtacaaaacctcgggaagaacagaaaagtcaggaaatggaaaatgacaaatgctca
ctctcaaagtctgtggccgtcacatactctttattccaggagaagaagctgaccttacaa
aacgtagctgagaataggattctgcctctcacagccgttggcatgcacttggcccaagca
gtgaaagctggctatcccctggatttggagcgagctggcctgaccccagaggttcagaag
attattgctgatgttatccgaaaccctcccatcaactcagatatgtataaagtgaaacta
attagaatgttagttcctgaaaacatagacacataccttatccacatggcaattgagtgc
tttgaaagtgatcctgacagccgaagccagccatcttgtggttccaacaggaagagatat
ttctccagctctgaagaaagctgttcgagtgccaagagaaacaaggaagtagtggtcact
gataacaaggctgatggaacacatcctgatagtttttcactgaaggacaaaggctgcaga
gattcactcagttcctggaatcagccaccggatgatccagacatggaagatttattttca
gattctaatccacagacttcatccgaaatctcaaagagaaaattgcctgtgtggtttgtc
aaaggagaggagaccttagctgatatcagcgagaaatcaatgaccagaacaaaaaagaaa
ggtcttttcggttaa
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integrated database retrieval system
