Nannospalax galili (Upper Galilee mountains blind mole rat): 103744117
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Entry
103744117 CDS
T03372
Symbol
Taf5l
Name
(RefSeq) TATA-box binding protein associated factor 5 like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103744117 (Taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngi03021
]
103744117 (Taf5l)
03036 Chromosome and associated proteins [BR:
ngi03036
]
103744117 (Taf5l)
Transcription machinery [BR:
ngi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103744117 (Taf5l)
Coactivators
SAGA/TFTC/STAGA complex
103744117 (Taf5l)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103744117 (Taf5l)
STAGA complex
103744117 (Taf5l)
TFTC complex
103744117 (Taf5l)
SAGA complex
103744117 (Taf5l)
SLIK complex
103744117 (Taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
TFIID_NTD2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_Aladin
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR41
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_RFWD3
PEP5_VPS11_N
WD40_like
Beta-prop_IP5PC_F
PROPPIN
WD_LRWD1
Ge1_WD40
Nbas_N
Mala_s_1-like
Beta-prop_NOL10_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
103744117
NCBI-ProteinID:
XP_008843999
UniProt:
A0A8C6QYI7
LinkDB
All DBs
Position
Un
AA seq
589 aa
AA seq
DB search
MKRVRTEQVQVAVSCYLKRRQYVDSEGPLKQGLRLSQTPEEMAANLTVQSESGCTNAVSA
APCQAEPQQYEVQFGRLRSFLTDSDSQYSHEVMPLLYPLFVYLHLNLVQSGPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFQLRSFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLAVHIHLDVQPAKRTDYQLYATGGSSRSESSGLEPPDVPSPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISSDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHHVDASRIRLACDTLEEEENEEDTVGTEMKILRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLVASASMDNSVRVWDIR
STSCNAPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtgcgcacggagcaggttcaggtggcggtgtcctgctacctcaaacgccgg
cagtacgtggactcagaaggccccttgaagcaaggcttacggctatcacagacccctgaa
gagatggcagccaacctcacagtccagtcagaatctggttgtaccaatgcagtgtctgca
gctccttgccaggcagaaccccagcaatatgaagtgcagtttggacgactgcgtagcttt
ctcactgattctgactcccagtacagccacgaagtgatgcctctcctctaccctctcttt
gtctacctccacctcaacctggtccagagtggccccaagagcacagtggaaagcttctac
agccgcttccatgggatgtttctgcagaatgcaagccaaaaggatgtcatcgagcagctg
cagaccacacagaccatccaggacattctatcgaacttccagcttcgctcattcctggac
aacaagtatgtggtccgtctccaagaagacagctacaactaccttatccgctacctccaa
agcgacaacaacactgccctgtgcaaggtgctggccgtgcacattcacctggacgtgcag
cctgccaagaggacagactaccagctgtatgccactggtggttcctcccgtagtgagagc
agtggcctggagcctccagatgtgcccagccctattctgcagaacgaagccgcactggaa
gtcttgcaggagagtatcaagcgtgtcaaggatggacctccctccctcaccaccatctgc
ttctacgccttctataacacagagcagctgctgaatactgcagagatctcctctgatagc
aaactgctggctgccgggtttgacaactcttgcataaagctctggagcttgcgatccaag
aagctgaaatcagagccccaccatgtagatgcatcccgcatccgcctggcttgtgacact
ctggaggaagaggagaatgaagaggatactgtgggcacagaaatgaagatcctacgggga
cactgtggcccagtgtatagtacacgattccttgcagacagctcaggactgctatcttgt
tctgaggatatgtccatcaggtactgggacctgggcagctttaccaacactgtgctgtac
caaggtcatgcctacccagtgtgggacgtggatatcagcccgtacagcctgtactttgcc
agtgggtcccatgaccgcactgccagactgtggtcttttgatcggacgtacccactgagg
atatacgcagggcacctggcagatgtggactgtgtcaaattccaccccaactcaaactac
ttggccacaggctccactgacaagactgtgcgactgtggagtgcccagcagggaaattca
gtgcgactcttcacaggtcaccgtggccccgtgctctcccttgccttttctcccaacggt
aagtacttggcatctgctggcgaagaccagcggttgaagctgtgggacttggcctccggg
accctttttaaagaactaagaggccacacagacagcatcaccagtctggccttcagccct
gacagcggtctggtggcctctgcctctatggacaactctgtgcgcgtctgggacatcagg
agcacatcctgcaatgcacctgctgatggctcttctggtgagctggtaggcgtgtacact
gggcagatgagcaatgtcctgagcgtgcagttcatggcctgcaacctcctcctggtgact
ggaatcacacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system
