Nannospalax galili (Upper Galilee mountains blind mole rat): 103744749
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Entry
103744749 CDS
T03372
Symbol
Smarcd2
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03082
ATP-dependent chromatin remodeling
ngi04714
Thermogenesis
ngi05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103744749 (Smarcd2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103744749 (Smarcd2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103744749 (Smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngi03021
]
103744749 (Smarcd2)
03036 Chromosome and associated proteins [BR:
ngi03036
]
103744749 (Smarcd2)
Transcription machinery [BR:
ngi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103744749 (Smarcd2)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103744749 (Smarcd2)
PBAF complex
103744749 (Smarcd2)
GBAF(ncBAF) complex
103744749 (Smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
103744749
NCBI-ProteinID:
XP_008844807
UniProt:
A0A8C6QD55
LinkDB
All DBs
Position
Un
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAVLGAPPPPAGPGMLPNPSLRGPGPSGGLGGPGVAAFR
PMGPVGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTATPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKTDGDNAGTAGTPGGTPAADKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtctggccgaggcgcgggcgggttcccgctgcccccgctgagccccggcggcggcgct
gttgccgcggtcctcggtgcgccgcctcctccagcgggacccggaatgctgcccaaccca
tcgctcaggggccccgggccttcaggaggcttggggggtcctggggttgccgccttccgc
cccatgggccccgtgggccccgcggcgcagtaccagcgacctggcatgtccccagggagc
cggatgcccatggccggcttgcaggtgggccctccggctggctccccatttggcacagct
actccacttcgacctggcatgccacctaccatgatggatccattccgaaaacgtttgctt
gtgcctcaggcccagcccccaatgcctgcccagcgccgggggttaaagaggaggaagatg
gcagataaggttctacctcaacgaattcgggagctcgtcccagagtctcaggcatacatg
gatctcttagcttttgagaggaagctggaccagaccatcgctcgcaagcggatggagatc
caagaggccatcaaaaagcctctgacgcaaaagcgaaagctccggatctacatttccaat
acattcagtcccagcaagacagatggtgataatgcaggaactgcagggaccccaggggga
accccagcagccgacaaggtggcttcctgggaactccgagtagagggaaaactcctggat
gatcctagcaaacagaagaggaagttttcttcattctttaagagccttgtcattgagttg
gacaaggaactgtatgggcctgacaaccacttggtggagtggcaccggatgcccaccacc
caggaaacagatggctttcaggtgaaacggccaggagatctcaatgtcaagtgtaccctc
ctgctcatgctggatcatcagcctcctcagtataaactggacccccgactagccaggttg
ctgggagtgcacacacagacaagggctgccatcatgcaggccctgtggctttacatcaaa
cacaaccagctgcaggatgggcatgagcgcgagtacatcaattgcaaccgttacttccgt
cagatcttcagctgtggccgactccgtttctctgagattcctatgaagctggctggattg
ctgcagcatccagatcccattgttatcaaccatgtcattagtgtggatcccaatgaccag
aagaagacggcctgttatgacattgatgtggaggtggatgacccactgaaggcccagatg
agcaactttctggcctctaccaccaaccagcaggaaattgcatctcttgatgtcaagatc
catgagactattgagtccatcaatcagctgaagacccagagagatttcatgctcagcttt
agcactgacccccaggacttcatccaggaatggctccgttcccaacgtcgagacctcaag
atcatcactgatgtgattggaaatcctgaggaggagagacgagctgctttctaccaccag
ccctgggcccaggaagcagttgggcggcacatctttgccaaggtgcagcagcgaagacag
gaactggaacaggtgctgggaattcgtctgacctaa
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integrated database retrieval system
