Nannospalax galili (Upper Galilee mountains blind mole rat): 103744803
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Entry
103744803 CDS
T03372
Symbol
Ssc5d
Name
(RefSeq) scavenger receptor cysteine rich family member with 5 domains
KO
K25740
soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
103744803 (Ssc5d)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SRCR
SRCR_2
Motif
Other DBs
NCBI-GeneID:
103744803
NCBI-ProteinID:
XP_008844871
LinkDB
All DBs
Position
Un
AA seq
1389 aa
AA seq
DB search
MRVLACLLAALVGIQAIERLRLADGPHGCAGRLEVWYNGRWGTVCDDGWDLRDAAVACRV
LGCGGALAAPGGAFFGEGSGPVWLSELACRGNEGHLGLCPHRGWKAHICSHEEDAGVVCA
GQRVANSRDDTTSLLDGDPWLALSEELSPSSEESRVTHAPRQAATPQNASRKKNPRPPKQ
AKSTRAPVLGSGGPRQERMRLVSGPHGCAGRLEVWHGGRWGTVCDDGWDLRDATVACREL
GCGGALAAPGGARFGPGAGPVWMDDVGCGGGEQALRDCPRSPWGRSNCDHTEDAGLVCSG
PAPRLRLADGPHGCAGRLEVWHGSRWGSVCDDAWDLRDAAVACRELGCGRALAAPGGAFF
GEGAGPIILDDLRCRGNETALRFCPARPWGQHDCHHREDAGAVCDGMPLGYVLPTAPAVD
SNSSTPREVASRPLSTTVGQTPGPRVSWPPPASPTAPPEPGPEAGSPQLRLVAGPNRCSG
RLEVWHNGRWGTVCDDSWDMRDSAVVCRELGCGGPRQSDPVAGRFGWGAGPIWLDDVGCV
GTEASLSDCPAASWGKHNCAHNEDVGVICIGTPGLDTISDPFSWSWLPGLGRDQDAWLPE
ELATKPSASHTPGVLEKTTKAPGKVQKSTKKWVTKNTRRPTTQPPGMPTTKRTRVPGTLN
PPNPTSRTSELPKRLTTEAPHRRTSHTTSKQTPQAPWEWTSETVATAATQRPQTSLEPYP
ESPEGSLESSKDPAPTPTTGIPVESGPFRVRLADGPDRCAGRLEVWHAGRWGTVCDDSWD
LRDATVACWELGCGKVRPRVGKTHYGPGTGPIWLDDMGCKGSETSLSDCPSGTWGKHNCD
HEEDVGLTCTGYTDDDDYPTWTWDPISGEELAKGTTVPAQSGHTLSIGTIRHPEFSSTAT
QSRPDTGDQGRYKISWTWDTPSGRGLSKGTPTTTRPGTTITTGTPKIPDHPSAAPRAHWD
PGSPRKPSPERRLLRPTAPRTAPTTSSPSPSALPGPSDSQLTSGSWPQLIPDTASKPEVT
TGPPDASPATPGLTPLMTSDLALSTPDVTLLPALAPEHSPSPPSTSPQGLTSDSSALTEG
TSLFPTSEVTPGSDTTPDLGTTPPPHTEPEGSESSDLPTNPTITTHPTSPPHPTTTPHPT
TIPHPTIDPQPPITHHSSTPAITTKSLPPSLVTELSSPPPAVRGKPSLHPDLIFVGAPHT
ITSHVQNLEPSPASDSDPSKPSPAPSMDPPFTEDFKPFSSQSPSAQTPHSASDPTVNPDL
HLSSMVHPLDQPSPDHHTLGPSPDHIPGPLGPCVSPTPPVRVMACEPPILVELVAAVREV
GDQLQRLTQVLEQDRQERQALGLGLVRLVEAAQGLGQLGETVKRLAWPPSTPMPTITTTE
EERPLRGDV
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcttggcctgcctccttgcagcactggtagggatccaggctatcgagcggcta
cgcctggctgatggtccccatggctgtgcaggccgcctggaggtctggtacaatgggcgc
tggggcaccgtgtgtgacgacggatgggatctacgggatgctgcagtggcctgccgggtg
ctgggctgcgggggggcactggccgcccctggaggggcattcttcggggagggctctggg
cccgtgtggcttagtgaactggcctgccggggcaatgaggggcacctgggcctctgtccc
caccggggctggaaagcccacatctgctctcatgaggaggatgcaggcgtggtttgtgca
ggtcagcgtgtggctaactctagggatgacacaacatccctgctggatggggatccatgg
ttggcactgtctgaggagctaagccccagctcagaggaatcccgtgtgactcatgctccc
cgccaagcagcaaccccccaaaatgcctcccgaaagaagaaccctcgaccacccaaacag
gccaagtccacccgggcccctgtgctgggaagcggaggcccccgccaggagcggatgcgc
ctggtctcaggtccccatggctgtgctggtcgcctggaagtctggcacggtgggcgttgg
ggcactgtgtgtgacgacggatgggatcttcgagatgccacagtggcctgcagggagctg
ggctgtggaggggcactggctgcccctgggggtgctagattcgggcctggtgcaggacct
gtgtggatggatgatgtgggatgtggaggaggagaacaggccctccgggactgtccccga
agcccatggggccggagtaactgtgaccacacagaggatgctgggcttgtctgcagcggt
cctgcacccaggctacgccttgctgatggcccccatggctgtgctggccgcctggaggtg
tggcatggcagtcgctgggggtcagtgtgtgatgatgcctgggatcttcgtgatgctgct
gtggcctgcagggagctgggctgtggcagggcgctggctgccccagggggtgccttcttt
ggggagggggccggacccatcatcttggatgatctccgttgtcggggaaatgagacagcc
ctgcgattctgcccggcaaggccctggggccaacatgactgtcaccaccgagaggatgct
ggggccgtgtgtgatggcatgcccctcggctatgtgttgcccacagcccctgcagtggac
agcaacagttcaacacccagggaggtggcatccaggcccctgtccaccacagtgggccag
accccaggcccaagagtcagctggcctcctccagcctctcctactgcccctccagagcct
gggccggaagctgggtccccccagctgcgcctggtggctgggcctaacaggtgctctggc
cggctggaggtatggcataatgggcgctgggggacagtgtgtgatgacagctgggacatg
cgagactcagctgtggtctgccgggagctgggctgtggaggacctcggcagtcagaccct
gtagcgggtcgctttggctggggcgcaggccccatctggctggatgatgtgggctgtgtg
ggaacagaggcttcgctgtctgactgtcctgctgcttcctgggggaaacataactgtgct
cacaatgaggatgtcggggtcatctgcattgggacccccggcctggacaccatctcagac
cccttcagttggagctggctccctgggttgggtagagatcaggatgcctggctcccggaa
gagctggccaccaagccctctgccagtcacacccccggtgtgctggagaaaaccacaaag
gctccagggaaagtgcagaagagcactaagaagtgggtgaccaaaaacacaaggagacca
accactcagccccctgggatgccaaccactaaacgcaccagagtcccaggcaccctaaac
cccccaaatccaacttcacgtacctctgagttacccaaaagactgaccactgaggctccc
cacagacggacttcacataccacctcaaagcagacccctcaggcaccctgggagtggacc
tcagagactgtggcaacagcagccactcaacgcccccagacctccctggagccataccct
gagagcccagagggttcgctggagtcatccaaagatccagcccccacccccactactgga
atccctgtggaatcaggccccttccgagttcgtctggctgatgggcccgacaggtgtgct
ggccggctggaagtgtggcatgctggacgctgggggacagtctgtgatgacagttgggac
ctgcgggatgccacagtggcctgctgggaactgggctgtggaaaggtccggccccgagtg
ggcaaaacccactatggccctgggactggacccatctggttggatgacatgggctgtaag
gggagcgagacgtcactgagcgactgtccctcggggacatgggggaaacacaactgtgac
catgaggaagacgtgggcctcacctgcactggctacacagatgatgatgattatcccacc
tggacctgggaccccatttccggagaggaattggccaaagggaccactgtgccagcacag
tctggacacactctttctattggtaccatcaggcacccggagttctcctccacggcaaca
cagagccgtccagatacaggtgaccagggtcgttataagatttcctggacatgggacaca
ccttcaggaaggggtctgtctaaagggacccccaccacaaccagacctggaaccactatt
acgactggcaccccaaaaattccagaccacccctctgcagctccaagggctcattgggac
ccaggttcacctaggaagccaagtcctgagcgccgactgctgcggcccactgcacccagg
acagcgcccaccacatcgtccccaagcccttctgccttgccggggccttctgactcacag
ctgacctctggctcctggccacaactcatcccagacacggcttcaaagccggaggtgacc
actggccctccagacgcgtctccagccaccccaggactgacccccttgatgacatctgat
cttgctttgtctacgccggatgtcactttacttccagctctggccccggagcactcaccc
agcccaccatccacctcaccccaaggactgacctctgactcttctgcactgacagagggg
accagccttttccctacctcagaggtgaccccaggatccgatacaaccccagacttgggc
acaacgccacccccccatacagaaccagagggttctgagtcctcagacctccccacgaac
cccaccatcactacacacccaacctctccccctcaccccaccaccacgccccaccctacc
acgatccctcaccccaccatagatcctcaacctcccatcactcaccacagctcaactcct
gccatcactacaaagtcccttccaccctccctggtgacagaactttcctctccccctcca
gcagtgaggggcaagccgagcctgcaccccgacctgatctttgtgggagcccctcacaca
atcacatcccatgtacagaatctagaaccctctccagcttcagactctgacccttccaaa
ccctctccagctccaagcatggacccaccattcacagaagacttcaaaccattcagcagt
cagagcccatctgctcagaccccacactcagcctctgaccccacggtgaaccctgacctt
cacctctcctccatggtccaccccttggatcaaccttcccctgaccaccacactctgggg
ccaagccctgatcacattccaggccctcttggcccatgtgtgtccccaacaccacccgta
agagtcatggcttgtgagccaccaatcttggtggagctggtggctgctgtgagggaggtg
ggtgaccaactgcagaggctgacccaggttctggaacaggaccggcaggagcgtcaagcc
ctggggctggggctggtccgattggtagaggctgcccagggtctggggcagttaggtgag
actgtaaagagactggcgtggccccctagcacacccatgcccaccatcaccaccacagag
gaggagaggcctctgaggggggatgtgtga
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