Nannospalax galili (Upper Galilee mountains blind mole rat): 103744899
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Entry
103744899 CDS
T03372
Symbol
Col15a1
Name
(RefSeq) collagen type XV alpha 1 chain
KO
K08135
collagen type XV alpha
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103744899 (Col15a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ngi00535
]
103744899 (Col15a1)
Proteoglycans [BR:
ngi00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
103744899 (Col15a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Laminin_G_2
DUF4129
Motif
Other DBs
NCBI-GeneID:
103744899
NCBI-ProteinID:
XP_008844967
LinkDB
All DBs
Position
Un
AA seq
1370 aa
AA seq
DB search
MAPRRTEQGYRPPWLLSITFALFSAVLQTHAGTGPASQNHLDLTELIGVPLPSSVSFVTG
YGGFPAYSFGPGANVGRPARTLIPPTFFRDFAISVAVKPSSAQGGVLFAITDAFQKVIYL
GLRLSSVEDGHQRIILYYTEPSSHVSHEAAAFSVPMMTNRWNHFAVTIQGEEVTLLMDCE
EHSRVLFQRSSQPLTFEPSAGIFVGNAGATGLERFMGSIQQLTVYTDSRTPEELCEAQES
SASGEASGFQEMDEVAETLEAVTYTQAPPKEAHVEPISMPPTLSSPAKDTELSGEPVPEG
TPETNSSIIGHSSPEQGSGEILNDTLEVPSSEDGSGAGALLGITEGRGLSAPVTGEAEVP
VTTGQEAEIGSVLTGRPTLSVSTQNPGQVTTPDPEDEEGLATAGSGETEVPISTAREAEA
SSMPTGGPTLSLFTQKPREEATLGPNVEEWLTPAAAVSQVPLGAFEEEEASGTAINSLDA
FTPTVALGQASEAPTDSQAALTPSASPEQVVITSAPADGEGLAASTEEAGGEGSGHMLPS
GPPLPKPTVIPERQVTLTQKVHMGMTEHAGPRGEKVGVEAEGSGLGWGLDGGSGSGDVMG
SEELLRGPPGPPGPPGSPGIPGKPGTDVFMGPPGPPGEDGATGEPGLPGPEGQPGLDGAS
GKPGMKGEKGARGPNGSAGEKGDPGNRGFPGPPGRNGQVGMPGVMGPPGPPGPPGPPGPG
CTAGLGFEDTEGSGSIPLLKEPRIPGPTPPSGPKGEKGDQGPKGERGMDGTGTMGPPGPR
GPPGRIEVLSSSLINITNGSMNFSDIPELMGPPGPDGVPGLPGFPGPRGPKGDTGVPGFP
GLKGEQGEKGEPGAILTGDIPLEMVKGRKGEPGIHGAPGPMGPKGPPGHKGEFGLPGRPG
RPGLNGLKGAKGDRGIMMPGSPGLPGPPGPPGPPGAVVNIKGAVFPVPARPHCKTPVGTA
HPGDPELVTFHGLKGEKGSWGFPGLKGEKGDQGAQGPPGPPVDPAYLRHFLNSLKGENGD
ARFWGDSNSNLFVSGPPGLPGHPGLVGQKGEAVIGPQGPPGIPGLPGPPGFGRPGAPGPP
GPPGPPGPPAILGAAVALPGPPGPPGQPGLPGSRNLVTAFSDMGDMLQKAHLVIEGTFIY
LRDSAEFFIRVRDGWKKLQLGELIPIPDDSPPPPALSSNPYHPQPPLNPILSANYERPSL
RLVALNTPVAGDIRADFQCFQQARATGLLSTFRAFLSSHLQDLSTVVRKAERFGLPIVNL
KGQVLFNNWDSIFSGDGGQFNTHIPIYSFDGRDVMTDPSWPQKVVWHGSNPHGVRLVDKY
CEAWRTTDMAVTGFASPLNSGKILDQKAYSCANRLIVLCIENSFMTDARK
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaggaggaccgagcagggctaccgcccgccatggctgctctccatcaccttc
gcgctgttctccgctgtcctgcagactcacgccgggacagggccggcctcccagaaccat
ctggacctcacagagctcatcggtgttcctctgccctcatctgtgtcctttgtcactggc
tatggtggctttccagcctatagctttgggcctggtgccaatgttggccgcccagccagg
acactcatcccacccaccttcttcagggactttgccatcagtgtggcggtgaagcccagc
agtgcccaaggcggtgtgctcttcgctattactgatgctttccagaaggtcatctacctg
ggcctgcggctctccagtgtggaggatggccaccagcggatcattctctactataccgag
cccagctctcacgtgtcccatgaagctgctgccttctcagtgcccatgatgactaacagg
tggaatcactttgccgtgaccatccagggtgaggaggtgaccctcctcatggactgcgag
gagcacagtcgtgtccttttccagcggtcctcccagcctctgacttttgagcccagtgca
ggcatctttgtaggcaatgcaggagctactgggctagagagatttatgggctccatacaa
cagctcactgtctacactgactccaggacccccgaggagctgtgtgaagcccaagagtcc
tcagcatctggagaagccagtgggtttcaggagatggatgaagttgctgagaccctggaa
gccgtcacctacactcaagccccgcctaaagaagcccacgttgaacccataagcatgcct
cctactttatcttctcctgctaaagacacagagctttctggtgaacctgtgccagaaggg
accccagaaaccaactcaagcatcattgggcacagcagccctgagcaagggtctggtgag
atcctgaatgacacactggaagtcccaagttctgaggatggctcaggggctggggccttg
ctgggtatcactgaaggtcggggattatcagcaccagtaacaggtgaggctgaagtgcct
gtcaccactggccaggaagcagagattggcagtgtgctcactgggagacccaccctgtct
gtgtccacccagaaccctgggcaagtgaccactccagatccagaggatgaagaaggtcta
gcaacagcaggatcaggggagactgaggtgcccatcagcactgccagggaagcagaggcc
agcagcatgcccactggggggccaaccctatctctgttcacccagaagccaagggaagag
gccacactgggtccaaatgttgaagagtggttaaccccagctgcagctgtgtcccaagtg
cctctcggtgcttttgaggaagaggaagccagcgggactgccatcaacagcctggatgcc
ttcacacccacagtggcccttgggcaagccagcgaggctcctacagacagccaggcagct
ctcacaccctcagcttcccctgagcaagtggttattacttctgcacctgctgatggagaa
ggcttggcagcctcaacagaggaggctggaggggagggctctggccatatgctccctagt
gggcctccactccccaaacccacagtgattcctgagaggcaggtcactctgactcagaaa
gtacacatgggaatgacagagcacgctgggcccagaggagaaaaggtgggagtggaggct
gagggctctggcctgggctggggcctggatggtggctcaggctctggagacgtgatgggc
agtgaggaattgttgagaggtcctcctggccccccaggcccacctggatcacctgggatt
ccaggaaagccaggaactgatgttttcatggggccccctggccctcctggagaggatgga
gctactggcgagccaggactcccgggtcctgaaggtcagcctggacttgacggagcttct
ggaaagcctgggatgaaaggagagaagggagcaagagggcccaatggttctgccggtgag
aagggtgaccctggcaaccgaggctttccagggcccccagggagaaatggacaagttggc
atgcctggggtcatgggaccaccagggcctcctggaccccctggacctccaggtcctggc
tgtacagcaggacttggatttgaggatactgaaggttctggaagcatcccactgctgaaa
gaacccagaatcccgggaccaacccctccaagtggtcccaaaggagaaaaaggtgaccag
ggacccaagggtgaaaggggaatggatggaacaggcaccatgggaccccctgggcccagg
gggccacctgggcgcatcgaggtcctgtccagttctttgattaacatcaccaatggatcc
atgaatttctcggacattcctgagctcatggggcctccggggccggatggtgtgcctggg
ctgccaggatttccaggccccagaggacccaaaggtgacactggtgtgcctggatttcca
ggactgaaaggagaacagggtgaaaagggagagccgggcgccatcctgactggggacatt
cctctggaaatggtgaaagggagaaagggtgaacctggaattcatggagccccaggaccc
atgggccccaaaggaccaccaggtcacaaaggagaatttggccttcccggacgacctggt
cgtccaggattgaatggcctcaagggtgccaaaggagatcgaggaatcatgatgccaggt
tcacctggcctacctggccccccaggacctcctggaccccctggagctgtggttaacatc
aaaggtgctgttttcccagtacctgcccggccacactgcaaaacaccagttggtactgct
catcctggggacccagagcttgtcaccttccatggtttgaaaggagagaaaggatcctgg
ggttttccaggtttgaaaggagaaaaaggtgatcaaggagcccaaggaccaccaggtcct
ccagttgatccagcttacctgagacattttctgaacagcttgaagggggagaatggagac
gcaaggttctggggagattccaacagcaacctctttgtgtccgggcctccgggcctacca
ggacatccaggcctggttggacagaaaggagaggctgttattgggccccagggaccccca
ggaattccaggtcttcctgggccacctggttttgggagaccaggtgcccctggaccacca
ggacccccagggccaccaggacctcctgcaatcctgggtgcagctgtggctcttccaggc
ccacctggccctcctggacagccagggctccctggatccagaaatttggtcacagcattc
agcgacatgggcgacatgcttcaaaaagcgcacttggtgatagaggggaccttcatctac
ctgagggacagtgcggagtttttcattcgtgtccgcgatggttggaaaaaattacagctg
ggagagctgattcccattcctgatgacagccccccaccaccagcgctttccagcaatcca
taccatccccagcctccactgaaccccattttaagtgccaattatgagaggccttctctg
cgtctggttgctctgaacacaccggtggctggggacatccgagctgattttcagtgcttc
cagcaggccagggctacaggactgctatctaccttccgagctttcctgtcatctcatttg
caagatctctccacagttgtgaggaaggcagagagattcggccttccaatagtgaacctc
aagggtcaagtgctttttaacaattgggactcaattttttctggtgatggaggtcagttc
aatacacacattccaatatattcctttgatggccgggacgtgatgactgatccttcttgg
ccccagaaggttgtctggcatggctccaacccccatggcgttcgtctcgttgataagtac
tgtgaagcttggcgaaccacagacatggcggtcacgggattcgcctcaccactgaactcg
gggaagattctggaccagaaagcatatagctgtgctaataggttaattgttctgtgcatc
gaaaacagtttcatgacagacgctaggaagtaa
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