Nannospalax galili (Upper Galilee mountains blind mole rat): 103745168
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Entry
103745168 CDS
T03372
Symbol
Kdm1b
Name
(RefSeq) lysine demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngi03036
]
103745168 (Kdm1b)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103745168 (Kdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox
Thi4
Pyr_redox_2
HI0933_like
DAO
SWIRM
Pyr_redox_3
FAD_binding_3
Lycopene_cycl
FAD_oxidored
FAD_binding_2
GIDA
NAD_binding_9
AlaDh_PNT_C
NAD_binding_7
2-Hacid_dh_C
zf-RING_2
Attractin
KARI_N
YjeF_N
Shikimate_DH
TrkA_N
Motif
Other DBs
NCBI-GeneID:
103745168
NCBI-ProteinID:
XP_008845294
LinkDB
All DBs
Position
Un
AA seq
824 aa
AA seq
DB search
MATSRGRSKKRAATFDLSPDSLPLRSSGRQAKKKATEVTDEDEDGVAEKKYRKCEKAGCT
AACPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKIWTS
NGKTEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTPHMAMTYRCGMKPNTTAKP
DTPDHCSLPEDLRVSEVSNHWWYSMLIQPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTNR
AVTTTNSSSPGKMEPSKAAPSTPVPGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFP
EYSRDPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCIQEVERILYFMTR
KGLINTGVLTVGADQYLLPKDYHNKSVIVIGAGPAGLAAARQLHNFGIKVTVLEAKDRIG
GRVWDDRSFKGVIVGRGPQIVNGCVNNPVALMCEQLGISMHKFGERCDLIQEGGRITDPT
IDKRMDFHFNALLDVVSEWRKDKSLLQDVPLGEKIEEIYRAFVKESGIQFSELEGQVLQF
HLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIRLKSPV
QSIDYTGDEVQVTMTDGTGHSAQKVLVTVPLAILQKGAIQFTPPLSEKKMKAINSLGAGI
IEKVALQFPYRFWDSKVQGADFFGHVPPSASQRGLFAVYYDMDPQKQQSVLMSVITGEAV
ASLRTLDDKQVLQQCMAVLRELFKEQEVPDPTKFFVTRWSTEPWIQMAYSFVKTFGSGEA
YDIIAEEIQGTVYFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcccgagggaggtcaaagaagagagctgccacgtttgatctttctccggat
agcctgcctttgaggagctccgggaggcaggcaaagaagaaagcaactgaggtcaccgat
gaggatgaagatggtgtggcagagaagaagtacaggaaatgtgaaaaggcaggctgcacg
gcagcgtgtcctgtgtgctttgccagtgcttccgagagatgtgccaaaaatggctacacg
tcgagatggtaccacctttcctgtggcgagcatttctgtaatgagtgctttgaccactac
tacagaagccataaagatggatatgacaagtatactacatggaaaaaaatatggaccagc
aatggcaaaactgaaccaagtcccaaagctttcatggcagaccagcagcttccctactgg
gttcagtgtacaaaacccgagtgcggaaagtggcggcagcttaccaaggaaatccagctt
actccacacatggcaatgacttaccggtgtggcatgaaaccaaatactactgccaagcct
gacaccccagatcattgttccctccccgaggatctgcgagtgtcggaagtttccaaccac
tggtggtactccatgctcatccagcctcctttgcttaaagacagtgtggccgcccccctg
ctctctgcctactaccctgactgtgtgggcatgagcccatcctgcaccagcacaaaccgt
gccgtcaccaccaccaacagttccagccctggaaagatggagccctccaaggcggccccc
tctacgcctgttccaggcatgaaccggtatttccagccattctaccagcccaacgagtgt
ggcaaagccctgtgcgtgaggcctgatgtgatggagctagatgaactctacgagtttcca
gagtactctcgagaccccactatgtacctggctctgaggaacctcattctggccctgtgg
tacacaaactgcaaagaagctctcactcctcagaagtgtattcctcacatcattgtccgg
gggcttgtgcgcatccgatgtattcaggaagtggagaggattctgtattttatgacgagg
aaaggtctcattaacaccggagttctcaccgtgggagctgaccagtatcttcttcctaaa
gattaccacaataaatcagttattgttattggggctggtccagcaggcttggcagctgcc
aggcaactccataactttggaattaaggtgactgtcctggaagccaaagaccgaatcgga
ggccgagtgtgggatgacaggtctttcaaaggcgtcatagtggggagaggaccccagata
gtcaatggctgtgttaataaccctgtagcactcatgtgcgagcaacttggcatcagcatg
cataagtttggagaaagatgtgacttaattcaggaaggtggacgaattactgaccccact
attgacaagcgcatggattttcattttaatgctctcttggatgttgtctctgaatggagg
aaggataagagtctgctccaagacgtacctttaggagagaagatagaggagatctacaga
gctttcgtgaaggagtctggcatccagttcagtgagctggagggacaggtgctgcagttc
catctcagtaacctggaatatgcctgtggcagcaacctgcaccaggtgtctgctcgctcc
tgggatcacaatgaattctttgcccagtttgctggtgaccacactcttctaacacctggg
tactctgtcatcattgagaaactggctgaagggttagacattcggctcaaatctccagtg
caaagcattgattatactggtgatgaagtgcaggtgaccatgacagatggcacaggacat
tctgcgcagaaggtgttagtcactgtacccctggccatactacagaaaggtgctatccag
ttcactccaccattgtcagagaagaagatgaaagccattaatagcttgggcgcaggcatc
attgagaaggttgccttgcagtttccttacagattttgggacagtaaagttcaaggggct
gacttttttggacatgttcctcccagtgccagccagcgagggctctttgctgtttactat
gacatggatccccagaagcagcagagtgtgctgatgtcggtcatcacaggggaggctgtg
gcgtccctcaggaccctggatgacaagcaggtgctccagcagtgcatggccgtcctccgg
gagctcttcaaggagcaggaagtcccagatcccacaaagttctttgtcactcggtggagc
acagagccgtggatacagatggcatacagctttgtgaagacatttggaagtggggaggcc
tatgacatcattgctgaagaaatacaagggactgtctattttgctggtgaggcaacaaac
cggcattttccacaaactgtcacaggagcgtatttgagtggtgtccgagaagcaagcaag
attgcagccttttaa
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