Nannospalax galili (Upper Galilee mountains blind mole rat): 103745317
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Entry
103745317 CDS
T03372
Symbol
Smarcd3
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03082
ATP-dependent chromatin remodeling
ngi04714
Thermogenesis
ngi05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103745317 (Smarcd3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103745317 (Smarcd3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103745317 (Smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngi03021
]
103745317 (Smarcd3)
03036 Chromosome and associated proteins [BR:
ngi03036
]
103745317 (Smarcd3)
Transcription machinery [BR:
ngi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103745317 (Smarcd3)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103745317 (Smarcd3)
PBAF complex
103745317 (Smarcd3)
GBAF(ncBAF) complex
103745317 (Smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
103745317
NCBI-ProteinID:
XP_008845458
LinkDB
All DBs
Position
Un
AA seq
495 aa
AA seq
DB search
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQAQSQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDVRPGPGLSRCPGPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHR
TPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALW
QYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVD
PSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDF
MLSFSRDPKGYVQDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQ
QRRQELEQSLVVRNT
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttgccggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgccccgggatgccgtctggagcccgaatgccccaccagggg
gcgcccatgggccccccgggctccccgtacatgggcagccccgccgtgcgacccggcttg
gcccctgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccgggcagagccag
gcacagagccagggccagccagtgcccaccgcccccgcgcggagccgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggattcgggagctggtcccggagtcccag
gcttacatggacctcctagcatttgagaggaaactggatcaaactatcatgaggaagcgg
gtggacatccaggaggccctgaagaggcccatgaagcaaaagcggaagctgcgcctttat
atctccaatacttttaaccctgcgaagcctgatgcagaagattctgacggcagcattgcc
tcctgggagctgcgggtggaggggaagctcctggatgatgtacgtcctggcccaggtctc
tccaggtgtcctgggcccagtaagcagaagcggaagttctcttccttcttcaagagtttg
gtcattgagctggacaaagacctttatggccccgacaaccacctcgttgagtggcaccgg
acacccaccacccaggagacagatgggttccaggtgaagaggccaggagacctgagtgtg
cgctgtaccctgctgctcatgctggactatcagcctccccagttcaaactggacccccgc
ttagcacggctgctaggattgcatacacagagtcgctcagccattgtccaggccctgtgg
cagtacgtgaagaccaacaggctgcaggactcccacgacaaggagtacatcaatggagac
aagtacttccagcagatttttgactgtccccgcctgaagttttctgagattccccaacgc
ctcacagccttgttgctgccccctgacccaattgtcatcaaccacgtcatcagcgtggac
ccatcagaccagaagaagacagcatgctatgacattgatgtggaagtggaggagccactg
aaggggcagatgagcagcttcctcctgtccacggccaaccagcaggagatcagtgctctg
gacagtaagatccatgagacgattgagtccataaaccagctcaagatccagagggacttc
atgctaagcttctccagagaccccaaaggctatgtccaagacctgctccgctcccagagc
cgtgacctcaaggtgatgacagatgtggccggcaaccctgaagaggagcgccgagccgag
ttctaccaccagccctggtcccaggaagccgtcagccgctacttctactgcaagatccag
cagcgcaggcaggagctggaacagtcgctggttgtacgcaacacctag
DBGET
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