Nannospalax galili (Upper Galilee mountains blind mole rat): 103745380
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Entry
103745380 CDS
T03372
Symbol
Pcdh20
Name
(RefSeq) protocadherin 20
KO
K16498
protocadherin delta 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103745380 (Pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngi01009
]
103745380 (Pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngi04515
]
103745380 (Pcdh20)
Protein phosphatases and associated proteins [BR:
ngi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103745380 (Pcdh20)
Cell adhesion molecules [BR:
ngi04515
]
Cadherins
Protocadherins
103745380 (Pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
103745380
NCBI-ProteinID:
XP_008845518
UniProt:
A0A8C6W790
LinkDB
All DBs
Position
Un
AA seq
945 aa
AA seq
DB search
MLRRGNAHSSRALAVSWRSETCHPRLDMGLLHRLRSSTSHRNLPHAFLLFLFVGPFSCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLMPRAAGRQSQQQQPEGNPPLSFSLASGGL
SGQYVTLDNRSGELHTSEQEIDREALCLDQGGGAAWGGSISIASSSSDTCLLLLDVLVLP
QEYFRFVKVKIAIRDINDNAPQFPVSQISVWVPENSPVNTRLAIEHPAVDPDIGINGVQT
YRLLDYHGMFTLDVEENENGERTPYLIVMGGLDRETQDHYVSIIIAEDGGSPPLLGSATL
TISISDINDNCPLFVDSQINVTVYGNATVGTPIAAVQAVDKDLGTNAQITYSYSQKVPQE
SKDLFHLDETTGVIKLFSQIGGSVLQMHKLTILANGPGCIPAVITALVSIIKVIFRPPEI
VPRYIANEIDDIVYLKELEPVNTPIAFFTIRDPEGKYKINCYLDGEGPFRLAPYKPYNNE
YLLETTKPMDYELQQFYEIAIVAWNSEGFHVKRSVKIQLLDDNDNAPVFLQPLIELTIEE
NNAPNAFLTKLYATDADSGERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDREEKEKYR
YTVRAVDSGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGVISVTDA
DAGRNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGEPPLSSTT
KITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVIAYSIIG
RRGPRPESFRINPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVNLFVNDT
VSNESYIESLLRKEPEINIEEKEPQISIEPTQRKVESVSCMPTLVALSVISLGSITLVTG
MGIYICLRKGKKQHREDENLEVQIPLKGKIHLHMRERKPMDISNI
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgctccgccgagggaatgcgcacagctcgcgggccctggctgtgagctggcgctcggag
acctgccacccgcgcctggatatggggcttctacatcgtctcaggagcagcaccagccac
aggaatctgccgcatgcatttctgcttttcctcttcgtgggacccttcagctgcctcgcg
agttacagtcgggccacggagcttctgtacagcctaaatgagggactgccagcaggggtg
ctcataggcagcttagctgaggacctgaggctgatgcctagggcggctgggagacagagc
cagcagcagcagccagaggggaacccccctctctctttcagcttggcctccgggggactg
agcggtcagtacgtgaccctagacaaccgctctggagagctgcacacttcggaacaggag
atcgatagagaggctctgtgtcttgaccagggtggaggagctgcctggggaggcagtatt
tccatcgcctcctcttcttctgacacttgccttttgcttctggatgtgctcgtcctgcct
caggaatatttcaggtttgtgaaggtgaaaattgccatcagggacatcaatgacaatgct
ccacagttcccagtttcccaaatctctgtttgggtccctgaaaattctcctgtaaacacc
cggttggccatagagcatcctgccgtggacccagacataggcattaatggcgtgcagacc
tatcgcttactggactatcatggtatgttcaccttggatgtggaggagaatgagaatggg
gaacgcacgccctacctaattgtcatgggtgggttggacagagaaacccaggaccattat
gtgagcatcatcatagctgaggatggtgggtctccaccactgttgggcagtgccaccctc
accattagcataagtgatattaatgacaattgccctctctttgtagactcacaaatcaat
gtcactgtgtatggaaatgctacagtaggcaccccaattgcagctgtccaggccgtggat
aaagacttggggactaatgcacagattacttacagttacagccagaaagttccacaagaa
tccaaggatctattccatctggatgaaacaactggagttattaaacttttcagtcagatc
ggtggaagtgttctacagatgcacaagctcaccatccttgctaatggaccaggctgtatt
cctgctgtaatcactgctctggtgtccatcattaaagtcattttcagacctcctgaaatt
gtcccacgttatatcgcaaatgagatagatgatattgtgtatctgaaggaactggaacct
gttaacactccaattgcattttttaccataagagacccagaaggcaaatacaagattaac
tgctacctggatggtgaagggccatttagattagcaccctacaagccctacaataatgaa
tatttgctagagaccacaaaacctatggactatgagctacaacagttctatgaaatagct
atagttgcctggaattcagaagggtttcatgtgaaaagaagcgtgaaaatacaactttta
gatgacaatgataacgctcctgtcttccttcaacccttgatagaactgaccattgaagaa
aacaatgcacccaatgcctttctgactaagctctatgctacagatgctgatagtggagag
agaggccaagtttcctatttcctgggacctgatgctccatcatatttttccttagacagt
gtcacaggaatactaacagtttctactcagctggacagagaagagaaagaaaaatacagg
tacactgtcagagctgtggactctgggaagccacccagagaatcagtggccactgtggct
ctcacagtgttggataaaaatgacaacagtcctagattcatcaacaaggacttcagcttt
tttgtaccagaaaactttccaggatatggtgaaattggagtcattagtgtaacagatgct
gatgctgggcggaatggatgggtggccctttccgtggtaaatcagagtgacatttttgtc
atagatacaggcaaaggcatgctgagagctaaagtctcattagacagagagcagcaaagc
tcttatactctgtgggtggaagctgttgatgggggtgagcctcccctttcctccaccaca
aaaattacaattcttcttctagacatcaatgacaaccctcctcttgttttgtttcctcag
tctaatatgtcttacctgctggttctgccttctactctccctggttccccagttacggag
gtctatgctgttgataaagacacaggcatgaatgctgtcatagcttacagcatcattggg
agacgaggtcctaggcctgagtccttccgcattaaccctaaaactggcaatattactctg
gaagaggccttgctgcaaacagactatggactacatcgcttattggtgaaagtgagtgat
catggttatcctgagcctctccattccacagtcatggtgaacttatttgtcaatgacact
gtcagtaatgagagctatattgagagtcttttaagaaaagaaccagaaattaatatagag
gagaaagagccacaaatctcaatagaaccaactcagaggaaggtagaatctgtgtcctgt
atgcccacattagtagctctgtctgtaataagcttgggttccatcacactagtaacaggg
atgggcatatacatctgtctccgcaaaggcaagaaacagcacagggaagatgaaaatttg
gaagtacaaattccactgaaaggaaaaattcacttgcatatgagagagagaaaaccaatg
gatatttccaatatttga
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