Nannospalax galili (Upper Galilee mountains blind mole rat): 103745537
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Entry
103745537 CDS
T03372
Symbol
Lhx5
Name
(RefSeq) LIM homeobox 5
KO
K18493
LIM homeobox protein 5
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
103745537 (Lhx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngi03000
]
103745537 (Lhx5)
Transcription factors [BR:
ngi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
103745537 (Lhx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
103745537
NCBI-ProteinID:
XP_008845692
UniProt:
A0A8C6R8D8
LinkDB
All DBs
Position
Un
AA seq
402 aa
AA seq
DB search
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANTENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDYYAPGGNYDFFTHGP
PSQAQSPADSSFLTASGPGSTPLGALEPPLAGPHSADNPRFTDMISHPDTPSPEPGLPGA
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggctgtgagcggcccatcctcgatcgcttcctactgaacgtg
ctggaccgcgcatggcacatcaaatgtgttcagtgctgcgagtgcaaaaccaacctctca
gagaagtgtttctctcgggaaggcaagctctattgtaaaaacgacttcttcaggcgtttt
ggcacaaagtgcgcagggtgcgcacaaggcatctcgcccagcgacctggtgcgcaaggcc
cgaagcaaagtcttccacctcaactgcttcacctgcatggtgtgcaacaagcagctgtcc
acaggggaagagctttacgtcattgacgagaacaagttcgtgtgcaaggaggactacttg
agctcctccagcctcaaggagggcagcctcaactcagtgtcatcctgtacagaccgcagt
ttgtccccggaccttcaggacccgctgcaggacgaccccaaggagaccgacaactccact
tcatcggacaaggagacggccaacaccgagaacgaggaacagaattccggcaccaagcgg
cgcggcccgcgcaccaccatcaaagccaagcagctggagacgctcaaggcagccttcgcc
gctacacccaagcccacgcgccacatccgcgagcagctggcgcaggagacaggcctcaac
atgcgggtcattcaggtgtggtttcagaatcgacggtccaaagaacgacggatgaaacag
ctgagcgcgctgggcgcccggagacacgccttcttccggagtccgcggcgcatgcgtccg
ctgggcggccgcttggacgagtctgagatgttggggtccaccccgtacacttactatgga
gactaccaaagcgactactacgctccgggaggcaactacgacttcttcacgcacggcccg
ccgtcgcaggcgcagtccccggccgattcgagcttcctgaccgcgtcagggcccggctcc
acaccactgggcgccctggaaccgccgctggccggcccgcacagcgcggacaaccccagg
ttcaccgacatgatctcgcatccggacacgccgagcccagagccgggcctgccgggtgcg
ctgcatcccatgccaggggaagtgtttagcggagggcccagcccgcccttcccgatgagc
ggcaccagtggctacagcggacccctgtcacaccccaaccccgagctcaacgaggcggcc
gtgtggtaa
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