Nannospalax galili (Upper Galilee mountains blind mole rat): 103745764
Help
Entry
103745764 CDS
T03372
Symbol
Lsm1
Name
(RefSeq) LSM1 homolog, mRNA degradation associated
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103745764 (Lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103745764 (Lsm1)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103745764 (Lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
103745764 (Lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
103745764
NCBI-ProteinID:
XP_008845975
LinkDB
All DBs
Position
Un
AA seq
143 aa
AA seq
DB search
MNYMPGTASLIEDIDMNSTTDTSEAEKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERI
HVGTKYGDIPRGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQTKLEAE
KLKVQALKDRGLSIPRADTLDEY
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgcccggcaccgccagcctcatcgaggatatcgacatgaactccaccaca
gatacatcagaagcggaaaaacacttggtcctgcttcgagatggacggacacttataggc
tttttaagaagcattgatcagtttgctaacttagtgctgcatcagactgtggagcgtatt
catgtgggcacaaagtacggggacattcctcgagggatctttgtggttagaggagaaaac
gtggtcttgctaggagaaatagacttggaaaaggaaagtgacacccccctccagcaagta
tctattgaagaaatcctagaagaacaaagggtagaacagcagaccaaactggaagctgag
aagctgaaagttcaggcccttaaagaccggggcctctccattcctcgagcagatactcta
gatgagtattaa
DBGET
integrated database retrieval system
