Nannospalax galili (Upper Galilee mountains blind mole rat): 103746610
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Entry
103746610 CDS
T03372
Symbol
Trpa1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
103746610 (Trpa1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngi04040
]
103746610 (Trpa1)
Ion channels [BR:
ngi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103746610 (Trpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
ANK_LRRK2
Acetate_kinase
DUF7694
Motif
Other DBs
NCBI-GeneID:
103746610
NCBI-ProteinID:
XP_008847101
UniProt:
A0A8C6W4B7
LinkDB
All DBs
Position
Un
AA seq
1120 aa
AA seq
DB search
MKCSRRRILRPEEQKELQGVVYRGVKVNMDSSKESFKVGFEGDTYRLEDFIKNRRKLSKY
EDENISPLHHAAAEGQVELMKMIIHSSSCEVLNIMDNYGNTPLHWAVEKNQVESVKFLLS
QGANPNLRNSNMMAPLHIAVQGTYNEMTKVLVEHNDTNINLEGENGNTAVMSASAKDNSE
ALQTLLDKGAKICKSNKWGDYPVHQAAFSGAKRCMELILKYGEKHGYRRELHINFVNHKK
VSPLHLAVQSGDLEMIKMCLDNGAHIDMIENGKCMALHFAATQGATDIVKLMISSYTGST
DIVNAVDGNQETLLHRASLFDHHDLADYLISVGADINSTDSEGRSPLILATASASWNTVN
LLLSKGAKVDIKDHLGRNFLHLTVQQPYGLKNLQPEFMQMQHIKELVMDEDNDGCTPLHY
ACKQGVPVSVNNLLGFNVSIHSKSKDKKSPLHFAACYGRINTCQRLLQDISDTRLLNEGD
LHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTLTMKVILNTNLK
CTDRLDEEGNTALHFAAREGHAKAVALLLNYNAEILLNKQQASFLHIALHNKRKEVVLTT
IRSKRWDECLQVFTHLSPSNRCPIMEMIEYLPECMKVLLDFCMIPSTEDKSCQDYHIEYN
FKYLQCPLTLTKKLTPTQDVTYEPLTMLNVMVQHNRVELLNHPVCKEYLLMKWCAYGFRA
HMMNLGSYCLGLIPMTLLVVNIKPGMAFNSTGIISETSDQLEVVDTTDSFPIKICMILVF
LSSIFGYCKEVVQIFQQKRNYFLDYNNALEWIIYTTSIVFVLPLFLNIPAHVQWQCGAIS
IFFYWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLLLAFGLSFYVLLNLQDAF
SSPLLSLIQTFSMMLGDINYRDSFLEPFLRKKLAYPILSFGQLIAFTMFVPIVLMNLLIG
LAVGDIAEVQKHASLKRIAMQVELHTNLEKKLPFWYLRKVDQKSTIVYPNRPRHGRMLRF
FHYFLCTQEARQEIPNTDTCLEMEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETE
DEDNHCSFQDKFKKERLEQMHSKWNFVLNAVKTKTQYPNY
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcagccggaggaggatcctgcgcccggaggagcagaaggagctccagggcgta
gtctatcgcggtgtgaaggtcaacatggacagctccaaggaatcctttaaggtgggtttt
gaaggagatacatacagactagaagattttatcaagaaccgaagaaaactaagcaaatac
gaggatgaaaatatctccccgttgcatcatgcagcagcagaaggtcaagttgaactgatg
aagatgatcatccatagttcctcttgtgaagtgctgaatataatggataattatggaaat
acccctctgcactgggctgtagagaaaaaccaggtggaaagtgtgaagtttcttctcagc
caaggagcaaacccaaacctccgaaatagcaacatgatggcaccccttcacatagctgtg
cagggcacgtacaacgagatgaccaaagtcttggttgagcataatgacacgaatattaat
ttagaaggagagaatggaaacacggctgttatgtctgcatctgccaaagataacagcgaa
gcattgcaaactttgttagataaaggagctaagatatgtaaatcaaataaatggggagat
taccctgttcaccaggctgccttttcaggtgccaaaagatgtatggaattaatattgaaa
tacggtgaaaagcatggctacagaagagagttgcatattaactttgtaaatcataagaaa
gtcagcccactgcacctggcagtccaaagtggtgacctggaaatgattaaaatgtgcctg
gacaatggtgcacacattgacatgatagagaatggcaaatgcatggcccttcattttgct
gcaacccagggagctactgacattgttaaactcatgatttcatcctatactggaagcact
gacattgtgaatgctgtcgatggcaatcaggaaaccctgcttcatagagcatctctattt
gatcatcatgacttggcagactacttaatttcagtgggagcagatatcaacagcactgat
tctgaaggccgctctccacttatattagcaactgcttctgcatcttggaatactgtaaat
ttgctgctctctaaaggtgccaaagtagacataaaagatcatctggggcgtaatttttta
catttgactgtacagcaaccttatggactaaaaaatttgcaacctgaatttatgcagatg
cagcatattaaggaactggtaatggatgaagacaatgatgggtgcacacctctccactat
gcatgcaaacagggtgtccctgtttctgtaaataacctccttgggttcaatgtgtcaatt
cattccaaaagcaaagataagaaatcgcctctgcattttgcagcctgttatgggcgcatc
aacacttgtcagaggctcctacaagacataagtgacacgaggcttttgaatgaaggggat
ctccatggaatgactcctcttcacctggcagcaaaaaatggacatgataaagttgttcaa
cttcttctgaagaaaggggcattatttctcagtgaccacaatggctggactgctttgcat
catgcatccatgggtggatacactctgaccatgaaggtcattcttaacactaacttgaag
tgcacagatcggctagatgaagaagggaatacagcactccactttgcggcccgggaaggc
catgccaaggctgtggcactacttctgaactacaacgctgaaatcctcctgaacaagcag
caggcctcctttctacatattgcactgcacaataagaggaaggaggtggttctcacgact
atcaggagcaaaagatgggatgaatgccttcaggtttttactcatttatcgccaagcaat
agatgcccaatcatggaaatgatagaataccttcctgagtgcatgaaagttcttttagat
ttctgcatgataccttccacagaggacaagtcctgtcaagactaccacattgagtataat
ttcaaatatcttcagtgcccgttaacattaaccaaaaaattaacacctacccaggatgtg
acgtatgagcctcttacaatgctcaatgtcatggtacaacacaaccgcgtagagcttctc
aaccaccctgtgtgtaaagaatacttacttatgaaatggtgtgcctatggattcagagcc
catatgatgaacctaggatcttactgtcttggtctcattccaatgacacttcttgtggtt
aatataaagccagggatggctttcaactcaacaggaataatcagtgaaactagtgatcaa
ctggaggtagtagacactacggattcatttccaatcaaaatatgcatgattttagttttt
ttatcgagtatatttggatattgcaaagaagtggtccaaattttccaacagaaaaggaat
tatttcctggattacaacaatgccctggaatggatcatctacacaacgagtatcgtcttt
gtgctgcccttgtttctcaatatcccagctcatgtacagtggcaatgtggagccatatca
atattcttctactggatgaacttcctactgtatcttcaacggtttgagaattgcggaatt
ttcattgttatgttggaggtgatatttaaaacgctgttgagatcgacgggggtgttcatc
ttccttcttttggcttttggactcagcttttatgtgctcctgaatttacaagatgccttc
agctctccattgctttccttaatccagaccttcagtatgatgctaggagacatcaattat
cgagattccttcctagaaccgttcttaagaaaaaaattggcatatccaattctttctttt
ggacaacttattgccttcaccatgtttgtcccaattgttctcatgaatttacttattggt
ttggcagttggtgacattgctgaggttcagaaacatgcatcgttaaaaaggattgctatg
caggtggaacttcataccaacttggagaaaaagctgccattctggtacttacgcaaagta
gaccagaagtctaccatagtgtatcccaacagacccagacatggaaggatgttacgattt
tttcattactttctttgtacccaagaagcaagacaagaaataccaaatactgatacatgt
ttggaaatggaaatattgaaacagaaataccggctgaaggacctcacttcgctcttggaa
aagcagcatgagctgatcaaactcatcattcagaagatggagatcatctcagagacagaa
gatgaagataaccactgttctttccaagacaagttcaaaaaagagcggctagaacaaatg
catagcaaatggaattttgtgttgaacgcagttaagacaaaaacacagtatcccaattac
tag
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