Nannospalax galili (Upper Galilee mountains blind mole rat): 103746822
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Entry
103746822 CDS
T03372
Symbol
Vps36
Name
(RefSeq) vacuolar protein sorting 36 homolog
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103746822 (Vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngi04131
]
103746822 (Vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngi04147
]
103746822 (Vps36)
Membrane trafficking [BR:
ngi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
103746822 (Vps36)
Exosome [BR:
ngi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103746822 (Vps36)
Exosomal proteins of colorectal cancer cells
103746822 (Vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
BBL5
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
103746822
NCBI-ProteinID:
XP_008847351
LinkDB
All DBs
Position
Un
AA seq
393 aa
AA seq
DB search
MDRFVWTSGLLEINETLVIQQRGVRVYDGEEKIKFDAGTLLLSTHRLIWRDQKNHECCMA
IPLSQIVFIEEQAAGIGKSAKIVVHLHPAPSNKEPGPFQSSKNSYIKLSFKEHGQIEFYR
RLSEEMTQRRWENMPVSQSLQTSKGPQPGRVRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMIKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGMELNXAQEMELLSPDLVHACKM
LEELKLPRRLSVFDSGVMIIELQYHKEEEMLASVLEMILEKGSLTSEEFAKLVGMSVLLA
KEGVLLAEKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgtgtggaccagcggtctcctggagatcaatgagacgctggtaatccag
cagcgcggggtgcgcgtctacgatggcgaggagaagataaaatttgatgccgggactctt
ctccttagtacacaccgactgatttggagagatcagaaaaatcatgagtgctgcatggcc
attcctctgtcccagattgtgtttattgaggaacaggcggctggaattgggaagagtgcc
aaaatagtggttcacctgcacccagctccttctaataaggaacctggtcccttccagagc
agtaagaattcctatatcaaactctccttcaaagaacatggccagattgagttttacagg
cgtttatctgaggaaatgacacagagaagatgggagaatatgccagtttcccagtcattg
caaacaagtaaaggaccccagccaggaagagtaagagctgtaggaatcgtaggtattgaa
aggaaacttgaagaaaaaagaaaggaaaccgacaaaaacatttctgaggcctttgaagac
cttagcaagctcatgatcaaggctaaggaaatggtggagctatcaaaatcaattgctaat
aaaattaaagagaagcaaggagacatcacagaagatgagaccatcaggtttaagtcctac
ttgctgagcatgggaatagccaacccagttaccagggaaacatatggctcaggcacacag
taccacatgcagctagccaaacaattggctggaatattgcaggcacctttagaggaacga
gggggaataatgtccctcacagaggtgtactgtttagtaaaccgagctcgaggaatggaa
ttaaactgagctcaagaaatggaactgctctcaccagatttagtgcatgcctgcaagatg
ctggaagagctgaaattgcctcgcaggctctcagtttttgacagtggtgtcatgataatt
gagcttcaataccataaagaagaagaaatgttggcctcggtcctagagatgattttagaa
aagggatccttaacatcagaagaatttgctaaacttgtgggaatgtctgtcctactggcc
aaagaaggggtgcttcttgcagagaagatgggccatctttgccgagatgactcagtggaa
ggcttacggttttatccaaatttatttatgacacagagctaa
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