Nannospalax galili (Upper Galilee mountains blind mole rat): 103747317
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Entry
103747317 CDS
T03372
Symbol
Smc1a
Name
(RefSeq) structural maintenance of chromosomes 1A
KO
K06636
structural maintenance of chromosome 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04110
Cell cycle
ngi04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103747317 (Smc1a)
04114 Oocyte meiosis
103747317 (Smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngi03036
]
103747317 (Smc1a)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103747317 (Smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
103747317 (Smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
103747317
NCBI-ProteinID:
XP_008847910
UniProt:
A0A8C6QVJ2
LinkDB
All DBs
Position
Un
AA seq
1233 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
ESVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctgaaactgattgagatcgagaactttaaatcctacaagggtcgacagatt
atcggaccatttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgccatcagctttgtgcttggtgagaaaaccagcaacttgcgagtaaagacc
ctgagggacctgatccatggagcgcctgtggggaagccagctgctaaccgggcttttgtc
agcatggtctactctgaggagggcgctgaggaccgcacctttgcccgtgtcattgtaggg
ggctcctctgagtacaagatcaacaacaaagtggtccagcttcatgaatacagtgaggag
ttagagaagttgggcattcttatcaaagctcgtaacttcctcgtctttcagggtgcagtg
gagtctattgccatgaagaaccccaaagagaggacagctctatttgaagagatcagtcgc
tctggggagttagcacaagagtatgacaagcgaaagaaggaaatggtgaaggctgaagag
gacacgcagtttaattaccatcgcaagaaaaatattgcagctgaacgcaaggaggccaaa
caagagaaagaagaggcggatcgctaccagcgcctgaaggatgaggtggtgcgagcacag
gtacagttgcagctctttaagctttaccataatgaagtggaaattgagaagctaaacaag
gaactggcctctaagaacaaggagattgagaaggacaaaaagcgaatggacaaggttgag
gatgagctgaaggagaagaagaaagagctgggcaaaatgatgcgggaacagcagcagatt
gagaaggagatcaaggagaaggactcagagctgaatcagaagcggcctcagtatatcaaa
gccaaggagaatacctctcacaaaatcaagaagcttgaagcagctaagaagtctctgcaa
aatgctcagaagcattataagaagcgtaaaggtgacatggatgagctggaaaaggagatg
ctgtcagtggagaaggcccggcaggagtttgaagaacggatggaggaagagagccagagc
cagggtagagacttgaccctggaggagaatcaggtaaagaaataccaccgattgaaagag
gaagccagcaaaagagcagccactttggcccaggagctggagaagtttaatcgagaccag
aaagctgaccaggaccgtctagatctggaagagcggaagaaagtagagacagaggccaag
atcaagcaaaagctacgggagattgaagagaatcagaaaaggatcgagaaactggaagaa
tatattaccactagcaagcagtccctagaagagcagaagaagctggagggagaactcaca
gaggaagtggagatggccaagcgacgtattgatgagatcaataaggaactgaatcaggtg
atggagcaattgggagatgcccgcattgatcgccaggaaagcagccgccagcaacgaaag
gcagaaataatggaaagcatcaagcgtctttatccaggttctgtgtatggccgcctcatt
gacctctgccagcccacacaaaagaagtatcagattgctgtgaccaaggttttgggaaag
aacatggatgctattattgtagactcggaaaagacaggccgggattgtattcagtatatt
aaggaacagcgtggggagcctgagaccttcttgcctcttgactacctggaggtgaaacct
acagatgagaaactccgggagctgaagggggccaagctagtaattgatgtgattcgctat
gagccacctcacatcaaaaaagccttgcagtacgcttgtggcaatgcccttgtttgtgac
aatgtggaggatgcccgacgcattgcctttggaggccaccaacgccacaagacagtggca
ctggacggaaccctgttccagaagtcaggcgtcatctctggtggggccagtgatctcaag
gccaaggcgcggcgctgggatgagaaagcagtggacaaattgaaagaaaagaaagaacgg
ttgacggaagagctgaaagagcagatgaaggcaaaacggaaagaggcagagctgcggcag
gtgcaatctcaggcccatggactacaaatgagactgaagtactcacagagtgacctagaa
cagaccaagacaaggcatcttgccctgaatctacaggaaaagtctaagctggagagtgag
ctggccaactttggacctcgaattaatgatatcaagagaatcatccagagccgagagagg
gaaatgaaagacttgaaggagaagatgaaccaggtggaagatgaggtgtttgaagagttt
tgtcgggagattggtgtgcgcaacatccgggaatttgaggaagaaaaggtgaagcggcaa
aatgaaattgccaagaagcgtttggagtttgagaatcagaagactcgcttgggtatccaa
ttggattttgaaaagaaccaactgaaggaggaccaggataaagtacacatgtgggaacaa
acagtgaaaaaggatgaaaatgagatagaaaagctcaaaaaggaggaacaaagacacatg
aagataatagatgaaactatggctcagctacaagaccttaagaatcaacatctggccaag
aagtcagaagtgaatgacaagaatcatgagatggaggagattcgcaagaaacttgggggt
gccaacaaggaaatgacccatttacagaaggaggtgacagccattgagaccaagcttgaa
cagaagcgcagtgaccgccacaacctgctacaggcctgtaagatgcaagacatcaagttg
ccattgtcaaagggtaccatggatgatattagtcaggaagagggtagctcccagggagag
gaatcagtgagtggttcccagaggacgtccagtatctatgcacgagaggccctcattgag
attgactatggtgacctgtgtgaggatctgaaggatgcacaggctgaggaggaaatcaag
caagagatgaacacactgcagcaaaagctgaatgagcagcagagcgtgcttcagcggatt
gctgcccccaacatgaaggccatggaaaagctggaaagtgtccgagacaagttccaagaa
acctcagatgagtttgaggcagcacgaaagcgagcaaagaaggccaagcaggcatttgaa
cagattaagaaggagcgctttgaccgattcaatgcttgctttgaatctgtggctaccaac
attgatgaaatctataaggctctgtcccgtaacagcagtgcccaggctttcctgggccct
gagaatcctgaagaaccctacttggatggcatcaactacaattgtgtagctcctggcaaa
cgtttccggcctatggacaatttgtcagggggtgagaagacagtggctgctctggccctg
ctttttgccatccatagctacaagccagcccctttcttcgtcttggatgagatcgatgct
gccttggataataccaatattggcaaggtggcaaattacatcaaggagcagtcaacttgc
aacttccaggccattgtcatctctctcaaagaggaattctataccaaggctgagagcctc
attggagtgtatcctgagcaaggggactgtgtgatcagcaaagtcctgaccttcgacctt
accaagtacccagatgccaaccccaacccaaatgaacagtag
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