Nannospalax galili (Upper Galilee mountains blind mole rat): 103747623
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Entry
103747623 CDS
T03372
Symbol
Taf1b
Name
(RefSeq) TATA-box binding protein associated factor, RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngi03021
]
103747623 (Taf1b)
Transcription machinery [BR:
ngi03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
103747623 (Taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
103747623
NCBI-ProteinID:
XP_008848347
LinkDB
All DBs
Position
Un
AA seq
590 aa
AA seq
DB search
MDLEEAKEFKERCSQCAAVSWGLTDEGKYYCTSCHNVTEKSKEVINSSVIPNTKINTINR
GLRKKRKHEKGWDWYVCEGFQYILYHQAEALKNLGVGSELKDEVLHSFWKRYLQKSKQAY
CKNPVNTSGRKTKVLKDNLHCSDWASEPELLSGGDTDFALESGAEFQSDAQIPKDFPITK
ASQSGAASVCSGSLDGVEYSLRKEKGIVKMTVPRTLAFCYLSLLWQRETITLSDLLRFVE
EDHIPYINAFERFPEEMKLYGRDKGIFAVESWPDYEEIYKNMIEVATFLDLPRFPEITED
CYLHPNILCMKYLMEVNLPDEMHGLTCQVVKMTGIGEVDFLTFDPIAKMKKTVKYDVQAV
AVIVVVLKLLFLLDDNLEWSYSDLAETYNEEHKEDKPQFGFRKWYQVMKKTFDEKKQKWE
EARAKYSWKSGKPLYHSHIDKSVAYKRREMVVNLQKQFSALVDSTPVVEKKGPSSFQFNW
TEEDINRPCFHEHTLQGLLVKKGQSLKTKNSLYWLSTQKFCKSYCKHVTTYEESNFSLSY
QFILNIFSFLLRIKTSILHEEVSLIEKKLFKKKYSESKKNSSRSKKIRRH
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggacctagaggaagcgaaagagttcaaagaacgctgttctcagtgtgctgctgtttct
tggggtcttactgatgaaggcaaatactattgtacttcttgccacaatgttacagagaaa
tctaaggaagttatcaactcttcagttattcctaataccaagataaacaccatcaacagg
ggtcttagaaagaaaagaaaacatgaaaaaggctgggattggtatgtttgtgaaggtttt
cagtacatactttatcaccaagcagaagcgttgaagaatcttggagtaggctcagagttg
aaggatgaagttttgcacagtttttggaagcgctaccttcaaaagagcaagcaagcgtat
tgtaaaaacccagttaatactagtggaaggaaaactaaagtgttgaaagataatctgcat
tgttcagactgggctagtgagcctgagctgctaagtggtggtgacactgactttgctcta
gaaagtggagcagagtttcagtctgatgcccagattccaaaggacttccccatcaccaaa
gcatcacagtcaggagctgcatctgtctgttctggatctcttgatggagtggaatactca
ttgagaaaggagaagggaattgtgaagatgactgtgccgaggacgcttgctttctgctat
ctgtccttactttggcagagagaaacaattactctttcagatcttttgagatttgttgaa
gaagaccatattccttacataaatgcttttgagcgttttccagaagagatgaaattatat
gggcgtgacaaggggatctttgctgtggagtcttggcctgactatgaagagatctataaa
aacatgattgaagttgccacatttttagatttgcctcgttttccagaaataactgaagac
tgctaccttcatcccaacatactgtgtatgaaatacttaatggaagtcaatcttcctgat
gaaatgcatggtttaacctgccaagtggtaaaaatgactggaataggagaagtggatttt
ctgacctttgatcctatagctaaaatgaaaaaaactgttaaatatgatgtacaagctgta
gcagtcattgtagttgtattgaaactgctctttttactggatgacaatttagaatggtct
tactccgatcttgctgaaacatataatgaagaacacaaagaagataagccacagtttggc
ttcagaaaatggtaccaagttatgaagaaaacttttgatgagaaaaaacaaaaatgggag
gaagcaagggcaaagtattcttggaaaagtggaaagccgctctaccattcacacatcgac
aaatcagtagcgtataaaagaagagaaatggtggtgaatttacaaaaacaatttagtgca
ctggttgattcaacaccagtggtcgaaaagaaaggtccttcgagttttcaattcaactgg
actgaagaagacattaatagaccttgtttccatgaacataccctccagggactcctggta
aagaaaggccagtcactgaaaaccaagaactcattgtattggctcagtacccagaaattc
tgcaaaagctattgtaaacatgtaacaacctatgaggaatcaaatttttcactgagttac
cagtttatactaaatatcttctccttcttactaagaataaagacctctattctccatgaa
gaagtgagcttaattgaaaagaaactttttaaaaaaaaatatagtgaatcaaagaagaac
tcttcaagatccaagaaaatacgaagacactga
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