Nannospalax galili (Upper Galilee mountains blind mole rat): 103747630
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Entry
103747630 CDS
T03372
Symbol
Cpsf3
Name
(RefSeq) cleavage and polyadenylation specific factor 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103747630 (Cpsf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngi03021
]
103747630 (Cpsf3)
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103747630 (Cpsf3)
Transcription machinery [BR:
ngi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103747630 (Cpsf3)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103747630 (Cpsf3)
U7-dependent histone pre-mRNA processing factors
103747630 (Cpsf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
103747630
NCBI-ProteinID:
XP_008848355
UniProt:
A0A8C6WAP6
LinkDB
All DBs
Position
Un
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFRNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEVMLQDIFGEDCVNVKDDSVLSVTVDGKTANINLETRMVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgcagaagagagcgaccagctgctgatccgaccacttggtgctggg
caagaagtaggaagatcatgtattattctggaattcaaaggaagaaaaataatgctggac
tgtgggatccaccctggcctagaaggaatggatgctcttccttatatcgatttgattgac
ccagctgagattgaccttctcttaattagtcatttccatttggatcactgtggagctttg
ccctggtttctccagaagacaagtttcaaaggaagaacattcatgactcatgccacaaaa
gcgatttatagatggcttctttcagactatgtcaaagttagtaacatatcagcagatgac
atgctatacactgagacagatcttgaagaaagcatggacaagattgaaacgatcaacttc
catgaagttaaggaagttgcaggaatcaaattttggtgttaccatgcaggccacgtcctg
ggagccgccatgtttatgattgagattgcgggtgtgaagcttttgtatacaggtgatttc
tcaaggcaagaagatagacacctcatggcagctgaaattcctaatatcaagccagacatt
cttatcattgaatctacttatgggacccatatccatgagaaacgtgaagagcgagaagca
agattctgtaacactgtgcatgacattgtcaacagagggggcagaggactcattcctgtc
tttgctcttggaagagctcaggagctgcttttgattctagatgaatactggcagaaccac
ccggagctgcatgacattccaatctactatgcttcgtccttggccaagaagtgcatggct
gtataccagacgtatgtgaatgctatgaatgacaaaataagaaagcagatcaacatcaac
aatccctttgttttcaaacacatcagtaacctcaagagcatggaccattttgatgacatt
ggccccagtgtggtaatggcctcaccaggcatgatacaaaatggcctatctagagagttg
tttgaaagctggtgtactgataagaggaatggcgtcatcatagcagggtactgtgtggaa
gggacacttgccaagcatatcatgtccgaacctgaagaaatcactaccatgtctggacag
aagttaccactgaaaatgtctgttgattacatttctttctctgctcacacagattaccaa
caaaccagtgaatttatccgtgctttgaaaccgcctcacgtgattttagtacatggagaa
cagaatgaaatggccagattgaaagctgcactgattagagaatatgaagataatgatgaa
gttcacatagaagttcacaatcctcggaatacagaagcagtgactctgaacttcagagga
gaaaagctggccaaggtcatgggctttttagcagataagaaaccagaacaaggccagcgg
gtttctggaatacttgttaaaagaaactttaattatcacatactttctccttgtgaccta
tccaattatactgacttggccatgagcactgtgaaacagacccaagccattccatatact
gggccttttaatttgctctattaccagctacagaagttgacaggtgatgtagaagaatta
gaaattcaagaaaaacctgctctgaaagtattcagaaatattactgtaatacaagaacca
ggcatggtggtactagagtggctggcaaacccttctaacgacatgtatgcagacacagtg
acaaccgtgatactagaagttcagtcaaatccaaaaataaggaaaggcgcagtacagaag
gtttctaaaaaattagaaatgcatgtttacagcaagcgattggaggtcatgctccaggac
atatttggagaagactgtgtaaatgtgaaagatgactctgtcctgagtgtcacagtggac
gggaaaacagctaatatcaatttggagacacggatggtagaatgtgaagaaggaagtgaa
gatgatgagtccctcagagaaatggtggaactagccgcacagagactgtatgaggccctt
acaccagttcactga
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integrated database retrieval system
