Nannospalax galili (Upper Galilee mountains blind mole rat): 103747721
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Entry
103747721 CDS
T03372
Symbol
Trim55
Name
(RefSeq) tripartite motif containing 55
KO
K10654
tripartite motif-containing protein 55
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103747721 (Trim55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngi04121
]
103747721 (Trim55)
Ubiquitin system [BR:
ngi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103747721 (Trim55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
GP67
Motif
Other DBs
NCBI-GeneID:
103747721
NCBI-ProteinID:
XP_008848477
UniProt:
A0A8C6RJN4
LinkDB
All DBs
Position
Un
AA seq
542 aa
AA seq
DB search
MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
YLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD
QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAVLV
GSNDRVQGVISQLEDTCKTIEECCRRQKQDLCEKFDSLYGILEERKTEMTQAITRTQEEK
LEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLQKISEASKAFQMEKI
EQGYEIMDHFTVNLNREEKIIREIDFYREEEEEEDEGEREEDGEDAVEVEVENVQIESSG
EDESLERASEPSQQASEPQAIPGRLLVSSPEPPSALPPAADIPVTQGEVVPTDSQQTTES
ETPGPSAAEAADPLFYPSWYKGQSRKVTANPPCTPGNEGLGQIGPPGTEESKVQSAEVAE
AAANERAAVSGKESSSPATTSQTGFEVPSPQGQAAASGSGSGADSEPARHVFSFSWLNSL
NE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcttctctgaattacaagtctttctccaaagaacagcagaccatggataacttg
gagaagcaactgatctgtcccatctgcctagagatgttcacaaagcctgtggtcattctc
ccgtgccagcacaacctgtgtaggaaatgtgccagcgacatcttccaggcctctaaccct
tacttgcccaccagaggaggcaccacggtggcatcagggggacgattccgctgcccctcc
tgcagacacgaagtggttttagacagacatggggtatatggacttcagaggaacctgctg
gtggaaaacatcattgacatctacaagcaggaatccaccaggccagaaaagaagtctgac
cagcccatgtgtgaggagcatgaagaggagcgaatcaacatctactgtctgaactgtgag
gtgcccacctgctccctgtgcaaggtgtttggtgctcacaaggactgccaggtggctcct
ctcactcatgtgtttcagaggcagaagtcagagctcagtgatggcatcgctgttcttgtg
ggaagcaatgatagagtccagggagtaatcagccagctggaggacacctgtaaaactatt
gaggaatgctgcagaaggcagaagcaggacctgtgtgagaagtttgattccctctatggt
atcctggaggagaggaagaccgaaatgacccaagccatcacccgaacccaagaagagaaa
ctggagcatgtccgagctctcatcaaaaagtattctgatcatttggagaatgtgtcaaag
ttggtcgaatcgggaatccaattcatggatgagccagaaatggctgtgtttctgcagaat
gccaaaactctgttacaaaagatctcggaagcatcaaaggcatttcagatggagaaaata
gaacaaggttatgagatcatggaccacttcacagtcaacctcaacagagaagagaaaatt
atacgtgaaattgatttttacagagaagaggaagaggaagaggatgaaggagaaagagaa
gaagatggagaggatgcagtggaagtggaagtagaaaatgttcaaatagagtcatcaggg
gaagatgaaagtctggaacgagcctcagagccctctcagcaggcttcagagccccaggct
atcccagggcgacttttggtttcctctccagaaccaccttcagccctaccacctgctgca
gatatcccggtgacacagggggaggtggtgcccactgactctcagcagaccacagagtct
gaaactccaggcccttcagcagcggaagcggcggatcccttgttttaccctagttggtat
aaaggccaaagccggaaagtcaccgccaacccaccttgcacccctgggaacgaaggtctg
gggcaaatagggcctccgggtactgaggagtccaaagtgcagtccgcagaagtggcagaa
gccgcagccaatgagcgggcagcagtgagtggtaaggaatctagttcacctgcaactacc
tctcagactggatttgaggtcccttctccccagggacaggctgcagcctcggggagtggg
agtggagctgattctgagccagctcgccacgtcttctccttctcctggttgaactccctg
aatgaatga
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