Nannospalax galili (Upper Galilee mountains blind mole rat): 103747872
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Entry
103747872 CDS
T03372
Symbol
Sort1
Name
(RefSeq) sortilin 1
KO
K12388
sortilin
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04142
Lysosome
ngi04722
Neurotrophin signaling pathway
ngi04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103747872 (Sort1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
103747872 (Sort1)
09156 Nervous system
04722 Neurotrophin signaling pathway
103747872 (Sort1)
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Paralog
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Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
103747872
NCBI-ProteinID:
XP_008848660
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All DBs
Position
Un
AA seq
766 aa
AA seq
DB search
MDLEAQSEHVFDDLSGSVSLSWVGDSTGVILVLTTFQVPLVIVSFGQSKLYRSEDYGKNF
KDITNLINNTFIRTEFGMAIGPENSGKVILTAEVSGGSRGGRVFRSSDFARNFVQTDLPF
HPLTQMLYSPQNSDYLLALSTENGLWLSKNFGGKWEEIHKAVCLAKWGSENIIYFTTYAN
GSCKADLGALELRRTSDLGKTFKTIGMKIYSFGLGGRFLFASVMADKDTTRRIHVSTDQG
DTWSMAQLPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHL
YTTTGGETDFTNVTSLRGVYITSMLSEDNSIQSMITFDQGGKWEHLRKPENSKCDATAKN
KNECSLHIHASYSISQKLNVPMAPLSEPNAVGIVIAHGSVGDAISVMVPDVYISDDGGYS
WAKMLEGPHYYTILDSGGIIVAIEHSNRPINVIKFSTDEGQCWQTYMFTQEPIYFTGLAS
EPGARSMNISIWGFTESFITRQWISYTIDFKDILERNCDEKDYAIWLAHSTDPGDYEDGC
ILGYKEQFLRLRKSSVCQNGRDYVVTKQPSVCSCSLEDFLCDFGYFRPENASECVEQPEL
KGHDLEFCLYGREEHLTTTGYRKIPGDRCEGGMNPAREVKDLKKKCTSNFLNPIKQDSRP
QGHSLSQNPAPPPLGYTENTHFPSPTQTQNSKSSSVPIILAIVGLMLVTVVAGVLIVKKY
VCGGRFLVHRYSVLQQHAEADGVDALDTASHAKSGYHDDSDEDLLE
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggacttagaagcccagtcagagcatgtgtttgatgacctcagtggctcggtgtccttg
tcctgggttggagacagcactggggttattcttgtcctgactactttccaagtaccactg
gtaattgtaagttttggacagtcgaagttatatcgaagtgaggattatggaaagaacttt
aaggatattacaaatctcatcaataacaccttcattcggactgaatttggcatggctatt
ggtcctgagaactctggaaaggtgatattaacagcggaggtgtctggaggaagccgtgga
ggaagagtgttcaggtcatcagactttgcaaggaactttgtacagacagatcttcctttc
caccctctgacgcaaatgctgtatagtcctcagaattctgattaccttttagccctcagc
acagaaaatggcctgtggttgtccaagaattttgggggaaaatgggaagaaatccacaaa
gcagtgtgcttggccaaatggggatcagaaaacatcatctattttaccacctatgcgaat
ggctcctgcaaagctgaccttggagccctggaattacggagaacttcagacttaggaaaa
accttcaaaaccattggcatgaaaatctattcatttggtcttggaggacgtttccttttt
gcctctgtgatggctgataaagacacaacaagaaggatccatgtgtcaacagatcaaggg
gacacatggagtatggcccagctcccgtccgtgggccaggagcaattttattctattctg
gcagccaatgacgacatggtattcatgcatgtggatgaacctggagataccggatttggc
acaatctttacctctgatgatcgaggcattgtctactccaagtctctggacaggcatctc
tacactaccacaggtggagagactgactttaccaacgtgacctctctccggggagtctac
ataacaagcatgctctctgaagataattctattcagagcatgatcacttttgaccaggga
ggaaagtgggaacacctgcggaagccagagaacagcaagtgtgatgccactgcgaagaac
aagaatgagtgtagccttcatattcatgcttcttacagcatctcccagaagctgaatgtt
ccgatggccccactttcagagcctaatgctgtgggcatagtcatcgctcatggtagcgtg
ggggatgccatatcagtgatggtcccagacgtgtacatctccgatgatggaggttactcc
tgggcaaagatgctggaaggaccccactattacaccattctggattccggaggcatcatc
gtggccattgagcacagcaaccgtcctatcaatgtgattaagttctccacagatgaaggt
caatgctggcaaacctacatgttcacacaagaacccatctacttcactggcctcgcttca
gagcctggagccaggtccatgaacatcagcatttggggattcacagaatctttcataacc
cgccagtggatttcctacacaattgattttaaagatatccttgaaaggaactgtgatgag
aaggactatgccatatggctggcgcactccacagaccctggagattacgaagatggctgc
attttgggctataaagaacagttcctacggctacgcaagtcatctgtctgtcagaatggt
cgagactatgttgtgaccaagcagccatccgtctgttcctgttccctggaggacttcctc
tgtgattttggctacttccgtccagaaaatgcctcagagtgtgtggaacagccagaactg
aaggggcacgacctagagttttgtctgtatggaagagaagaacacctgacaaccaccggg
taccggaaaattcctggagacagatgcgaaggtggaatgaacccagctcgggaagtgaag
gatttgaaaaagaaatgcacaagcaatttcttgaatcccattaagcaggactcccgccca
cagggacacagcttgtcccagaatccagctccgcctcctcttggatacactgaaaacaca
cacttcccatctcccacccagacgcagaattccaagtcgagttctgttcccattatcctg
gctatcgtgggattgatgctggtcacagttgtggcaggagtgctcattgtgaagaaatat
gtctgtggtggaaggttcctggtgcaccgatactctgtgctgcagcagcatgcagaggcc
gatggagtggatgctttggacacggcctcccatgctaaaagcggttatcatgatgattca
gatgaggacctcctggaatag
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