Nannospalax galili (Upper Galilee mountains blind mole rat): 103748783
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Entry
103748783 CDS
T03372
Symbol
Cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103748783 (Cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103748783 (Cstf3)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103748783 (Cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
103748783
NCBI-ProteinID:
XP_008849782
UniProt:
A0A8C6QVA8
LinkDB
All DBs
Position
Un
AA seq
717 aa
AA seq
DB search
MSGDAAAEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFREEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAVEGNGPVESNTVLTKAVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagacgccgcggctgagcaggcagctgagtatgtcccagagaaggtgaagaaa
gcggaaaagaaattagaagagaatccatatgaccttgatgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacctatgagcgccttgttgcccag
tttcccagttctggcagattctggaaactatacattgaagcagagattaaagctaaaaat
tatgacaaggttgaaaagctatttcaaagatgccttatgaaggttttgcacattgattta
tggaagtgttatctttcatacgtccgagaaaccaagggtaaactaccaagttacaaagaa
aaaatggctcaagcttatgactttgcactggataaaattggaatggaaattatgtcctat
cagatttgggtggattatatcaatttcttaaaaggagtggaggctgttggatcttatgca
gaaaatcagagaataacagctgtccgaagagtttatcaacgaggttgtgttaatccaatg
atcaacatcgaacaactctggagagactacaacaagtatgaagagggtatcaatattcat
ttagctaaaaaaatgattgaagatcggagtagagattacatgaatgctaggcgtgttgca
aaggaatatgagacagtaatgaaaggtttggatcgtaatgctccttcagtgcctcctcag
aatactcctcaagaagctcagcaagtagatatgtggaagaaatatatacagtgggaaaag
agcaaccctcttcgtacagaggatcagacccttataacaaaaagagttatgtttgcttat
gaacagtgcctacttgtgttgggccatcaccctgatatttggtacgaagctgcccagtat
ctggaacagtcaagtaaactgcttgcagaaaagggagatatgaacaatgccaaattattt
agtgatgaagctgctaatatatatgaaagagccataagcactttattaaagaagaacatg
cttctttactttgcatatgcagattatgaagagagccgtatgaagtatgagaaggttcac
agcatatataacagacttctggctattgaggatattgaccccaccttggtatatatccaa
tatatgaaatttgcaaggagagcagaaggtatcaaatctggaagaatgatatttaaaaaa
gcacgagaggatgccagaacccgccatcatgtctatgttactgcagcactcatggagtat
tactgtagtaaggataaatctgttgcctttaagatttttgaattgggacttaagaaatat
ggagacattccagaatatgtcttggcttatattgactatctttctcacctcaatgaggac
aataatacacgagttttgtttgaacgggttttaacatctggaagccttcctcctgagaag
tctggagaaatctgggctcggtttctagcttttgaaagtaatattggtgatttagctagt
atactcaaagtggaaaaaagacggtttacggcattcagagaagagtacgaaggcaaagaa
acagctctactggtagacagatacaaattcatggatttatacccttgctctgcaagtgaa
ctaaaagcactgggctacaaggatgtctcccgtgctaagctagcagctataattccagac
ccagttgtagctccttctatagtgcctgttctgaaagatgaagtggatagaaaaccagag
taccctaagccagacactcagcagatgattccatttcaaccacgacatttagcacctcca
ggcttacacccggtccctggtggagtgtttccagtgccccctgcagctgttgttttaatg
aaacttctccctcctccaatctgtttccagggtccttttgtacaagtggatgaactgatg
gaaattttccgaagatgcaagataccaaatactgttgaggaagctgtgaggatcattact
ggtggggccccagagctggctgtggaaggcaatggccccgtggaaagcaacacagtgctc
actaaggctgtcaaaaggcccaacgaggattcagatgaagatgaagaaaaaggggctgta
gtcccccctgttcatgacatttacagagcgcggcagcagaagcgaatacgatga
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