Nannospalax galili (Upper Galilee mountains blind mole rat): 103748921
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Entry
103748921 CDS
T03372
Symbol
Abca1
Name
(RefSeq) ATP binding cassette subfamily A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi02010
ABC transporters
ngi04148
Efferocytosis
ngi04975
Fat digestion and absorption
ngi04979
Cholesterol metabolism
ngi05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103748921 (Abca1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103748921 (Abca1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
103748921 (Abca1)
04979 Cholesterol metabolism
103748921 (Abca1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
103748921 (Abca1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ngi02000
]
103748921 (Abca1)
Transporters [BR:
ngi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103748921 (Abca1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
103748921
NCBI-ProteinID:
XP_008849924
UniProt:
A0A8C6QGG5
LinkDB
All DBs
Position
Un
AA seq
2261 aa
AA seq
DB search
MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDAQRLLLYSQKDT
SIKDMHKVLRTLRQIKNSNSNLKLQDFLVDNESFSEFLHHNLSLPRPTVDNLLQADVSLH
KVFLQGYQLHLASLCNGSKLEDIIWLGDQEVSALCGLPREKLDTAERVMRANMDILKPVV
TRLNSTSPFPIQPLAEATKMLLDSLGSLAQELFSTRSWSDMRQEVIFLNTVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTDDDADTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELS
PKIWTFMENSQEMDLVRTLLDSKGNGPFWEQKLDGLDWTAQDIMVFLAKNPEDVQSLNGS
VYTWREAFNETNQAIQTISRFMECVNLNKLEPIPTEVRLINKSMELLDERKFWAGIVFTG
LTPDSTELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFL
FLSVFAVVTILQCFLISTFFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSIKIFAS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTAVSMMLFDTFLYGVMTW
YIEAVFPGQYGIPRPWFFPCTKSYWFGEESNEKSHSGSNQKGVSKICKEEEPTHLKLGVS
IQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSSIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSCLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEDSGVDAE
TSDGTLPARRNRRAFGDKQSCLRPFTEDDAIDPNDSDIDPESRETDLLSGMDGKGSYQLK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVSNDAPEDMGTQELLNALTKDPGFGTRCMEGNPIPDTPCLVGEEDWTTAP
VPQTIMDLFQNGNWTMKNPSPTCQCSSDKIKKMLPVCPAGAGGLPPPQRKQNTADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNSQGLPPSQEVNNAIKQMKK
LLKLAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQK
GENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNSIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWELVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVKAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELTKI
YRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILTN
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEK
YASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFG
IAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttggcctcagctgaggttgctgctgtggaagaacctgacgtttagaagaagg
caaacgtgtcagctgttactggaagtggcctggcctctatttatcttcctgatcctgatc
tctgtccggctgagctacccaccttatgaacaacatgagtgccactttccaaacaaagcc
atgccttctgcgggaactcttccctgggtacaggggattatctgtaatgccaacaacccc
tgtttccgttatccaactccgggtgaggctcctggcgttgttggaaactttaacaagtcc
attgtgtctcgcctgttctcagatgctcagaggcttcttttatacagccagaaagacacc
agcatcaaggacatgcacaaggttctgagaacattacggcagatcaagaattccaactca
aatttgaagctccaggattttttggtggacaatgaaagcttctctgaattcttgcatcac
aatctctctctcccaaggcctactgtggataacctgctgcaggctgatgtcagtctccac
aaggtatttttgcaaggttaccagttacatttggccagtctgtgcaatggatcaaaatta
gaagatatcatctggcttggtgaccaggaagtttctgccctttgtggtcttccaagggag
aaactagacacggcagagcgagtaatgcgtgccaacatggacatcctgaagccggtcgtg
acaagactaaactctacatctcccttcccaatccagccactggctgaagccaccaaaatg
ttgctggacagcctggggagtctggcccaagagctgttcagcacgaggagctggagtgac
atgcggcaggaggtaatatttctgaacaccgtgaacagctccagctcatccactcagata
taccaggctgtgtctcgcattgtctgtgggcacccggagggtggggggctcaagatcaag
tctctcaactggtacgaggacaacaactacaaagccctctttggaggcaacagcactgac
gacgatgcggacaccttctacgacaattctacaactccttattgtaacgatttgatgaag
aacttggagtctagtcctctttctcgaattatttggaaagcactgaagccattgcttgtt
ggaaagattctatatacacctgacactccagccacgaggcaggtcatggccgaagtgaat
aagacctttcaggaattggctgtgttccatgacctggaaggcatgtgggaggaactcagt
cccaagatttggaccttcatggagaacagccaagagatggaccttgtccggacattgctg
gacagcaaaggcaatggccccttttgggaacagaagttggatggtttagattggacagcc
caagacatcatggtgtttctggccaagaacccagaggatgtccagtctctgaatggctct
gtgtatacatggagagaagctttcaatgagaccaaccaagcaatccagacgatatctcgc
ttcatggagtgtgtcaacctcaacaagctggagcccattccaacagaagtccgactcatc
aacaagtccatggagctgctggatgagagaaagttctgggctggtattgtgttcacggga
ctcactcccgacagcactgagctgccacatcacgttaagtacaagatccgaatggacatt
gacaatgtagagcggacaaataagatcaaggatgggtattgggatcctggtccccgggct
gaccccttcgaggacatgcgctatgtctgggggggctttgcctacttgcaggatgtggtg
gagcaggcaatcatcagagtgctgacgggaactgagaagaaaacgggtgtctacatgcag
cagatgccctacccttgctatgttgatgacatcttcttgcgggtcatgagccggtccatg
ccactcttcatgacactggcctggatatactctgtggctgtgatcatcaagggcattgta
tatgagaaggaggcacgcctgaaggagaccatgcggatcatgggcctggataacggcatc
ctctggttcagctggttcatcagtagcctcatccctctgcttgtgagcgctggcctgctg
gtggtcatcttgaagttaggaaacctgctgccctatagtgaccccagcgtggtgttcctt
ttcctgtctgtgttcgccgtggtcaccatcttgcagtgcttcctcatcagtacgttcttc
tcccgggccaacctggcagcagcctgtgggggcatcatctacttcacgctgtacctgccc
tacgtcctgtgcgtcgcctggcaggactatgtgggcttctccatcaagatctttgcgagc
ctgctgtctcctgtggcttttggatttggctgtgagtactttgccctttttgaggagcaa
ggcatcggggtgcagtgggacaacctctttgagagcccagtggaggaagatggcttcaat
ctcaccaccgcagtgtccatgatgctgtttgataccttcctctatggggtgatgacatgg
tacatcgaggccgtctttccaggtcagtatggaatccccaggccctggttctttccttgt
accaagtcttactggtttggtgaggagagcaatgagaaaagccactctggttccaaccag
aagggagtatccaaaatctgcaaggaagaagagcccacccatctgaagctgggtgtgtct
attcagaacctcgtgaaggtttaccgggatggcatgaaggtggctgtcgatggcttggca
ctaaacttttatgagggccagatcacctccttcctgggccacaatggagcaggaaagaca
accaccatgtcaatactgacagggttgttccctccaacttcgggcactgcctacatcctg
ggaaaggacattcgctccgagatgagctccatccggcagaacctgggagtctgtccccag
cataatgtgctgtttgacatgctgactgttgaggagcacatctggttctacgctcgccta
aaggggctctcagagaagcacgtaaaagcagagatggagcagatggctctggatgttggc
ttaccccccagcaagctgaaaagcaaaacaagtcagctgtcaggtgggatgcagagaaag
ctgtctgtggccttggcctttgtgggtggatccaaggttgtcattctggacgagcccaca
gctggcgtagacccttactctcgcaggggaatatgggaactgctgttgaaatataggcaa
ggccgcaccattattctttctacacaccacatggatgaagcagacatcttgggggatagg
attgccatcatttcacatgggaagctatgttgcgtgggttcttccctgtttctgaaaaac
cagctgggaacaggttactacctaaccctagtcaagaaagatgtggaatcctccctcagt
tcctgcagaaatagcagcagcactgtgtcgtgtctgaaaaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtt
tctgctatctccaacctcatcaggaagcatgtctctgaagcccggctggtggaagacatt
ggacatgaactgacctatgtgctcccctatgaagctgctaaggagggagcctttgtggaa
ctcttccatgagattgacgaccggttgtcagacctgggcatctccagttatggcatctca
gagaccaccctagaagagattttcctcaaagtggctgaagacagtggtgtagatgctgag
acctcagatggtaccttgccagcgaggcgaaacagacgggcctttggggacaaacagagc
tgtcttcgtccattcactgaagatgatgctattgatccgaatgactctgacatagaccca
gaatccagggagacagatctgttaagtgggatggatggcaaaggctcctaccagctgaag
ggctggaaactcacacaacaacagtttgtagcccttttgtggaagaggctgctgattgcc
agacggagtaggaaaggattctttgctcagattgtcctgccagctgtcttcgtctgcatt
gccctggtgttcagcctgatcgtgccaccctttggcaagtaccccagcctggaactccag
ccatggatgtacaatgagcagtatacatttgtcagtaatgatgctcccgaggatatgggc
acccaggaactcttgaatgctctaactaaagacccaggctttggaacccgatgtatggaa
ggaaacccaatcccagacactccttgcttggttggggaggaggactggaccacggctcct
gttccccagaccatcatggacctcttccaaaatgggaactggacgatgaagaacccctct
cctacctgccagtgtagcagtgacaagatcaagaagatgctgcccgtgtgtcctgcaggg
gcaggggggctgccacctcctcagagaaaacagaacactgcggatatccttcagaatctg
accggaagaaacatttcggattatctggtgaagacatatgtgcagatcatagccaaaagc
ttgaagaataagatctgggtaaatgagtttcggtatggaggattttccctgggtgtcagt
aattctcaaggacttcctccgagtcaagaagttaataatgctatcaagcaaatgaagaag
ctcttgaagctggccaaggacagttctgctgatcgatttctaagcagcctgggaagattc
atgacaggactggacaccaaaaacaatgtcaaggtgtggttcaataacaagggctggcat
gccatcagctctttcctgaatgttatcaacaatgccatcctccgggccaacctacagaag
ggagagaatcctagccagtatgggattactgctttcaatcatcctctgaatctcaccaag
cagcagctctcagaggtggctctgatgaccacatcagtcgatgtccttgtgtctatctgt
gtcatctttgcgatgtcgtttgtcccagccagctttgtagtgttcctgatccaggagcgg
gtcagcaaagcaaagcacctgcagttcatcagtggggtgaagcctgtcatctactggctc
tccaactttgtctgggatatgtgcaattatgtggtccccgctacgttggtcattatcatc
ttcatctgcttccagcagaagtcctatgtgtcctccaccaacctgcctgtgctagccctt
ctgcttttgctgtatggatggtcaatcacacctctcatgtacccagcatccttcgtgttc
aagatccccagcacagcctacgtggtgctcactagcgtgaacctcttcatcggcatcaat
ggcagtgtggccacttttgtgctggagctcttcaccaacaataagctgaatagcatcaat
gacatcttgaagtctgtgttcctgatcttcccacatttttgcctggggcgagggctcata
gacatggtgaaaaaccaggcaatggctgatgctctggagaggtttggggagaatcgcttt
gtgtctccactctcctgggaactggtgggacgaaacctttttgccatggccgtggaggga
gtggtgtttttcctcattactgttctcatccaatacagatttttcatcaggcccagacct
gtgaaggcaaagctcccacctttgaatgatgaagatgaggatgtgaggcgggagaggcag
cgaattctggatggtggaggacagaacgacatcttggaaatcaaagagctgacaaagatc
tacagaagaaagaggaagcctgccgtcgacaggatttgtgttggcattcctcctggcgag
tgctttggactcctgggagttaatggtgctggaaaatcatcaactttcaagatgttaact
ggagacaccactgttaccaggggggatgctttccttaacaaaaatagcatcttaacaaat
atccatgaagtccatcagaacatgggctattgcccacaatttgatgccatcacagagctg
ctgactgggagagagcatgtggaattctttgccctcttgaggggagtccctgagaaagaa
gttggcaaggttggtgaatgggcaattcgaaaactgggccttgtgaagtatggagaaaaa
tatgccagtaactacagtggcggcaacaagcgcaagctttccacagccatggctctgata
ggtgggcctcctgtggtgtttctggatgaaccaaccacaggcatggaccccaaggccagg
aggttcttatggaattgtgccctaagcatcattaaagagggaagatccgtagtgcttaca
tctcatagtatggaagaatgtgaagccctttgcacgaggatggccattatggtcaatggg
aggttcaggtgccttggaagtgttcaacatctgaaaaacaggtttggagatggttatacg
atagttgtacgaatagcagggtccaaccctgacctgaagcctgtccaggagttctttgga
atcgccttcccaggaagcgtcctcaaagagaagcaccggaacatgctgcagtaccagctt
ccgtcctccttatcctctctggccaggatattcagcatcctctcccagagcaaaaagcga
ctccacatagaagactactctgtttctcagacaacacttgaccaagtatttgtgaacttt
gccaaggaccaaagtgatgatgaccacttgaaggacctatcattacacaaaaaccagaca
gtggtggatgtggcagttctcacatcctttctgcaggatgagaaagtgaaagaaagttat
gtatga
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integrated database retrieval system
