KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103748984
Entry
103748984         CDS       T03372                                 
Symbol
Helq
Name
(RefSeq) helicase, POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ngi03400]
    103748984 (Helq)
Enzymes [BR:ngi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     103748984 (Helq)
DNA repair and recombination proteins [BR:ngi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    103748984 (Helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 DNA_pol_lambd_f DGKD_4H
Other DBs
NCBI-GeneID: 103748984
NCBI-ProteinID: XP_008849995
LinkDB
Position
Un
AA seq 1055 aa
MEEGGSRIRRRVSARKRNRSLEGICASPPATQSLTGADQEEEAGAGSRRRKTVGLEPGQQ
SDSEEDMFGDSYTENSFLAQVDALEQKYMQSPEHRKHVTDFATEDLCSESIQNKLGITAV
SNLSGSKMNEDAKNQIGHDVPVEPGDGLLFEVPSSQVLYFEHLQNTSNDLGHQSTEERDR
NSHKTADEDLSCTRLEQPQQNDEFTSTVKDTSEMSRTKSVKDHLKSAMTGNAKAQTPVFS
RSKHFKETLLSEEISVAKRAIESSSDDLGPFYSLPSKVRDLYAQFRGIEKLYEWQHTCLT
LGSVQKRKNLIYSLPTSGGKTLVAEILMLQELLCRKKDVLMILPYVAIVQEKISGLSSFG
IELGFFVEEYAGSKGKFPPTKRREKKSLYIATIEKGHSLVNSLIESGRISTLGLIVVDEL
HMIGEGSRGAVLEMTLSKVLYTSKTTQIIGMSATLSNVEDLQEFLKAEYYTSQFRPVELK
EYLKINDTIYEVDSKAADGLTFSRLINYKYSDALKKMDPDHLVALVTEVIPSYSCLVFCP
SKKNCENVAEMLCKFLSKDCLKHREKEKHEVIKNLRNISNGNMCPVLKRTIPFGVAYHHS
GLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAQEFLKRNQYKQMI
GRAGRAGIDTVGESILILQEKDKEQVLELINRPLENCYSHLVQEFTKGIQSLFLSLIGLK
IATNLDDIYQFVNGTFFGVQQKVLLKEKSLWEITVDSLRYLTEKGLLQKDSQNSEEGSHC
HFHITKLGRASFKGTIDLAYCDILYKDLKKGLEGLVLESFLHLVYLVTPYDVGSQCNPDW
MVYFRQFNQLSPAEQTIAAFLGISESFIGKKAAGQAIRKNVDKGIINRLYLSFVLYSLLK
ENNIWSVSEKFNMPRGYVQNVLTGAASFASCVLHFCEELEEFWVYRALLVELTKKLTYCV
KAELIPLMEVTGVLEGRAKQLYNAGYKSLKHLANANPEVLVRTIDHLSRRQAKQIVSSAK
MLLHEKAEALQEEAEELLRLPPDFPGMGDSATEQA
NT seq 3168 nt   +upstreamnt  +downstreamnt
atggaggaaggcggctcccgcatccgccggcgtgtgtctgcccgcaaaaggaatcgtagc
ttagagggcatctgtgcctctccccccgcgacccagtccctgaccggcgccgaccaggag
gaggaagcgggggccgggagccggcgacgaaaaactgtgggcctggagcccggccagcaa
agtgacagtgaagaagacatgtttggtgacagctatacagaaaactcctttttagctcaa
gttgatgccctagaacagaaatatatgcaatctcctgaacataggaaacatgttacagac
tttgccaccgaagatctttgttcagaaagcatccaaaacaaacttggtattactgctgta
agcaacttgtctgggtctaaaatgaatgaggatgcaaagaaccagattggccatgatgtc
cctgttgaacctggagatggtcttctgtttgaagtgccatcttctcaagtcttatatttt
gaacatttgcagaacacttcaaatgatttgggtcatcagtctactgaagaaagagacagg
aactcacacaagacagcagatgaagacttgtcctgtactcgactagaacagccccagcaa
aatgatgaattcacttctacagtcaaggatacttcagagatgagtaggacaaaaagtgta
aaggatcatctgaaaagtgccatgactgggaatgccaaagcccagacaccagtattttct
aggagtaaacacttcaaagagacgctcctgtctgaagaaattagtgttgctaagagagca
attgagtcgtcatcagatgatcttggtcctttttattcacttcccagcaaagtgagagac
ctttatgctcagttcagaggaattgaaaagttatatgagtggcaacatacatgtttaaca
ttgggttctgtacaaaaaagaaaaaatttaatatattccttgccaacaagtggtggaaaa
actcttgtggctgagattttaatgctacaagaactactttgccgaaagaaagatgtttta
atgatccttccatatgtggcaattgtccaagaaaagatttcaggtttatcaagttttggt
atagaactcggtttctttgttgaagaatatgctggaagcaaaggaaaatttcctccaact
aaaagaagagaaaagaaatcactatatattgccactattgaaaaagggcacagcctggtg
aactccttgattgaaagtggaaggattagtactttgggtctgattgtggtagatgagttg
cacatgattggcgaagggagtcgtggtgctgtcctggagatgaccttgtcaaaagtcctc
tacactagcaaaacaactcaaattattggtatgagtgcaacgctaagcaatgttgaagac
ctacaagagttccttaaagccgagtattacaccagtcagtttagaccagttgaattaaaa
gaatatctgaaaataaatgatacaatatatgaagtagacagcaaagctgcagatggcttg
actttttcacggctcattaattataagtattctgatgccctgaaaaaaatggaccctgac
cacttggtagcattggtgacagaagtgattcccagttattcctgcctagttttttgtccc
agtaagaagaactgtgaaaacgtagcagaaatgttatgcaaatttttaagcaaagactgt
ctaaagcacagagagaaagaaaaacatgaagtgattaagaacttgaggaacatcagcaat
ggcaacatgtgtcctgtcttgaagcgcaccatccctttcggagttgcctatcaccacagt
ggtttaacaagtgatgaaaggaagctcctggaggaggcctattccaccggtgttctctgc
cttttcacctgcacatccaccctggcagcgggggtcaacctcccagcacgaagagttatt
ttaagagctccctatgttgctcaagaattcttaaagaggaatcaatataaacagatgatt
ggcagggctggccgtgctggaatagatactgtaggggagagtatccttatattgcaagaa
aaggacaaggaacaggtcttggaactaataaacagaccactggaaaactgctatagccat
cttgttcaggaattcactaagggaatccaaagtttgtttctttctttaattggtttgaag
attgcaacaaatcttgatgacatatatcaatttgtgaatggtacgttttttggtgttcag
caaaaggttttactgaaagaaaaaagtctctgggaaataactgttgactcacttagatac
ctgacagagaaaggactcctgcaaaaggactctcaaaattctgaagaagggtcacattgt
cattttcacattacaaaactaggacgagcttcctttaagggaactatagatttggcttat
tgtgacattctatataaagacttaaagaaaggtcttgaaggcctcgttcttgaaagcttt
cttcacctggtctacctagtaactccctatgatgttggttctcagtgtaaccctgattgg
atggtatacttcagacagttcaatcaactcagtccagcagagcaaactatagctgctttt
cttggcatctctgaaagctttatcgggaagaaagcagcagggcaggccatcaggaagaat
gtggacaagggcattatcaacagactctatctatcttttgttctttattccttattgaaa
gagaacaacatttggagtgtatctgaaaaatttaatatgccccgaggatatgtacaaaat
gtgctcacgggagctgcctccttcgcgtcttgtgtgttgcatttctgtgaggaactggag
gagttttgggtttatagagcccttttggtagaacttaccaagaagttaacatactgtgtt
aaggcggagctaatcccactcatggaagtgaccggggtcttagagggtcgagcgaaacag
ttatacaatgcgggttacaaaagtctaaagcacttagcgaatgccaatccagaagtgcta
gtaaggacaattgatcatctgtcaagacgccaggccaagcaaattgtttcttcagcaaag
atgctgctgcatgaaaaagcagaggctttgcaagaagaagctgaggagttactgagattg
cctcccgacttccctggcatgggggactctgccaccgaacaggcatga

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