Nannospalax galili (Upper Galilee mountains blind mole rat): 103749115
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Entry
103749115 CDS
T03372
Symbol
Cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103749115 (Cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103749115 (Cnot10)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103749115 (Cnot10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
ARM_TT21_N
TPR_12
TPR_19
ARM_TT21
TPR_8
TPR_7
TPR_MalT
TPR_17
DUF6058
Motif
Other DBs
NCBI-GeneID:
103749115
NCBI-ProteinID:
XP_008850151
UniProt:
A0A8C6RGX8
LinkDB
All DBs
Position
Un
AA seq
744 aa
AA seq
DB search
MAADKPADQGAEKHEGMGQSSGITDQEKELSTSAFQAFTSGNYDACLQHLACLQDINKDD
YKIILNTAVAEFFKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGNNNKNGKNETGSNTNKDGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTTGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDNVCAQLSASSTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPTKKGI
VQSIVGQGYHRKIVLASQSVQNTVYNDGQSSAIPVASMEFAAICLRNALLLLPEEQQDPK
QENGSKNSGQLAGNTESSESNETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKRVPQCYPSSVNSARTVMLFNLGSAYCLRSEYD
KARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPTVKTHSEVRK
KPVFQPVHPIQPIQMPAFTTVQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacaagcctgctgatcagggagcagagaaacatgaagggatgggccagtca
tctgggatcactgaccaagagaaggagctgtctaccagtgctttccaggcgttcacatct
ggaaattatgatgcctgtctgcaacaccttgcctgtctccaagatataaacaaagatgat
tataaaataattttgaatacagcagtagctgagttttttaaaagtaatcaaacaacaaca
gataatttgagacaaacacttaaccagctgaagaatcaggtccactcggctgttgaagaa
atggatggattagatgatgttgaaaacagcatgttgtattataatcaagcagttattctt
tatcatctgcggcagtatacagaggcaatatctgttggtgaaaagctttatcagttcata
gaacctttcgaagaaaaatttgcccaggcagtgtgttttctgcttgtagacctgtatata
ttaacctatcaagctgagaaagctttgcatcttcttgctgtcctagaaaaaatgatttca
cagggtaacaataataaaaatgggaagaatgagactggcagtaataccaacaaagatgga
tctaatcataaagctgagagtggagctctaatagaagctgcaaaatcaaagatacaccag
tacaaagtaagagcttatatccaaatgaagtccctgaaagcatgcaaaagggagatcaag
tcagtcatgaacacaactggaaattctgcaccctccctgtttcttaaaagcaattttgag
tacttaaggggcaattatcgaaaagctgtgaagctattaaatagttcaaacattgctgag
catccaggattcatgaaaacaggtgaatgcttgaggtgtatgttctggaataatcttggt
tgcatccattttgccatgagcaagcacaatttggggattttctactttaagaaggctctg
caggaaaacgataacgtctgtgcccagctcagtgcaagtagcactgatccaggcaaaaaa
ttttctggaagacccatgtgtaccttactaaccaacaaaagatatgagctgctgtataac
tgtggaattcagcttcttcacatcggaaggcctcttgctgccttcgagtgtcttattgaa
gctgttcaggtttatcacgcaaatccccgcctttggctacgactggctgaatgctgcatt
gctgccaataaaggaacttctgagcaagaaactaaaggtcttcccaccaaaaagggcatt
gtacagtctattgttggtcaaggctatcaccggaaaatcgttctggcatcacagtccgtt
cagaacaccgtgtataacgatggacagtcttcagccattcctgtagccagtatggagttt
gcagccatttgtcttagaaatgccttgttgctgttacctgaagaacagcaagacccaaag
caggaaaatggctccaaaaacagcggccaactagcagggaacactgagagcagcgagagc
aacgaaacatgcagcagtaaaagccatgatggggataaattcattccagctccaccttct
tctcctttgagaaaacaagaactagaaaacttaaagtgttccatactcgcttgcagtgct
tatgtggctttggccttgggtgataacctcatggctttgaatcatgcagataaacttctt
cagcagcccaagctgtcagggtctcttaaatttttgggccatttatatgctgcagaagcc
ctcatctccctggatagaatatctgatgctatcacacacttgaacccagagaacgtcact
gatgtctccttagggatttcttcaaatgagcaggaccaaggatcagacaagggtgaaaat
gaagcaatggaatcctctggcaagcgtgtccctcagtgctaccccagttctgtcaactct
gcccggactgtgatgctgttcaacctgggcagtgcgtactgcttgaggagcgagtatgac
aaagctcggaagtgtctgcaccaggcggcttcaatgatccatcccaaagaagtgccccct
gaggccatcttgctggcagtctaccttgaactgcaaaatggtaatacccagctggcccta
cagattatcaagaggaaccagctgctccctacagtgaaaacccactctgaagtgagaaag
aagccagtgtttcagcctgtccacccgatccagcccatccaaatgccagccttcaccacc
gtgcagaggaagtga
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