Nannospalax galili (Upper Galilee mountains blind mole rat): 103749550
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Entry
103749550 CDS
T03372
Symbol
Cdc40
Name
(RefSeq) cell division cycle 40
KO
K12816
pre-mRNA-processing factor 17
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103749550 (Cdc40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngi03041
]
103749550 (Cdc40)
Spliceosome [BR:
ngi03041
]
Complex C
Other components
Step II factors
103749550 (Cdc40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
EIF3I
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WD_LRWD1
WDR54
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
103749550
NCBI-ProteinID:
XP_008850637
UniProt:
A0A8C6S2V8
LinkDB
All DBs
Position
Un
AA seq
579 aa
AA seq
DB search
MSAAIAALAASYGSGSGSESDSDSEGSRCPLPAADSLMHLTKSPSAKPSLTVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDSHQVSTKYIGSVEEAEKNQGLTVFESGQKKTEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQSLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgcgattgcagctctagctgcttcctatggttcgggttcggggtccgaatcg
gattcggacagcgagggcagtcggtgtccgctgccagccgccgactccctcatgcacttg
accaaatcgccttcggccaaaccctcactgacagtagcggtggactcggctccggaggta
gcagttaaggaagacttggagactggagttcaccttgaccctgctgtcaaagaagttcag
tataatcctacctatgagaccatgtttgctcctgagtttggaccagaaaatccctttcga
acacagcaaatggctgctcctagaaacatgctttctggatatgctgaaccagctcatatc
aacgatttcatgtttgaacagcaaagaagaacttttgccacatatggttatgcattggac
ccttcattagatagtcatcaagtatctactaaatatattggttctgtagaagaagctgaa
aaaaatcaaggtttaactgtatttgaaagtggtcagaagaaaacagaaaagaggaaaaag
ttcaaagaaaatgatgcatctaatattgatggtttcttgggaccctgggcaaaatatgtg
gatgaaaaagatgtggccaaaccttcagaagaggaacaaaaagaattggatgaaatcaca
gcgaagagacagaaaaaaggcaaacaggaggaggagaaacctggggaggagaagacaatc
ttgcacgttaaggaaatgtatgactaccaaggcaggtcctaccttcatattcctcaggat
gttggtgttaatctacggtcatctgtgccacctgagaaatgttaccttccaaaaaaacaa
attcatgtgtggtctggacacactaagggtgtcagtgcagtcagattgtttcctctctct
ggccatttgttgctgtcttgctccatggactgtaaaattaagctatgggaagtttatgga
gaccggcgctgtctgcgaacatttattggtcacagtaaagctgtgagagacatctgcttc
aatactgcaggaacacagttcctcagtgcagcttatgacagatatcttaaactctgggac
accgagacaggacagtgtatatcaagatttacaaaccgaaaagtgccctattgtgtcaaa
tttaatcctgatgaagataagcaaagtctctttgtggctgggatgtctgataaaaagatc
gtgcaatgggacattcgcagtggggagattgtacaggaatacgatcggcatttgggagct
gtcaacaccattgtttttgttgatgagaatcgaagatttgtgagtacgtctgatgataag
agcctaagagtttgggaatgggatatccctgtggatttcaagtatatagcagagcccagt
atgcactcaatgcctgcagtgactttgtctccaaatggcaagtggctagcatgccagtca
atggacaaccagatcttaatttttggagcacagaacagattcagattaaataagaagaaa
atttttaagggacatatggtagcaggctacgcttgtcaggtggacttttcgccagacatg
agctatgtgatttcaggagatggaaatggaaaattaaacatttgggactggaagaccaca
aaactatacagtcggtttaaagctcatgataaagtgtgcataggtgcagtgtggcatcca
catgagacatccaaggtcatcacatgtggttgggatggcctcattaaactgtgggattaa
DBGET
integrated database retrieval system
