Nannospalax galili (Upper Galilee mountains blind mole rat): 103749977
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Entry
103749977 CDS
T03372
Symbol
Mid1
Name
(RefSeq) midline 1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103749977 (Mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngi04121
]
103749977 (Mid1)
Enzymes [BR:
ngi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103749977 (Mid1)
Ubiquitin system [BR:
ngi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103749977 (Mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
FN3_DSCAM-DSCAML_C
TRIM_CC
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
103749977
NCBI-ProteinID:
XP_008851136
UniProt:
A0A8C6RV68
LinkDB
All DBs
Position
Un
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESISAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMSSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSIHLYTFDVAFAQPVCPTFTVWNKCLTIITGLPIPDHL
DCTEQLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgccctatttgtctggagctctttgaggaccct
ctcctcctgccctgcgcacacagcctctgcttcaactgtgcccatcgtatcctggtgtcg
cactgtgccaccaacgagcctgtggagtccatcagcgccttccagtgccccacctgccgg
catgtcatcacgctcagccagcgaggtctagacgggctcaagcgcaacgtcaccctgcag
aacatcattgacaggttccagaaagcatctgtgagtgggcccaattcccccagcgagacc
cgcagggagcgggcctttgacgccaacaccatgtcctccgccgagaaggttctctgccag
ttctgtgaccaggatcctgcccaggacgctgtgaagacctgtgtcacttgtgaagtttcc
tactgtgaggagtgcctgaaagccactcacccgaacaagaaaccctttacaggccatcgt
ctgattgagccaatcccggactcgcacatccgggggctgatgtgcctggagcatgaggat
gagaaggtgaatatgtactgtgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gttgggcggcaccgcgatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaacttagagagtaaccttaccaaccttattaagaggaacacagaactggagaccctt
ttggctaagctcattcaaacttgtcaacatgttgaagttaatgcatcacgtcaagaagcc
aagttgacagaagaatgtgatcttctcattgagatcattcagcaaagacgacaaatcatt
ggaaccaagatcaaagaagggaaggtgatgaggctgcgcaaattggctcagcagattgca
aactgcaagcagtgcatcgaaaggtcagcatcactcatctcccaggcagaacactctctg
aaggagaatgaccatgcccgtttcctacagaccgcaaagaatatcactgaaagagtctcc
atggcaactgcatcctcccaggtcctgattcctgaaatcaacctcaatgacacatttgac
accttcgccttagatttttcccgagaaaagaaattgctagaatgtctggattaccttaca
gctcccaaccctcccacaattagagaagagctctgcacagcttcatatgacaccatcacg
gtccactggacctcggacgatgagttcagtgtggtctcctatgagctccagtacactata
ttcaccggacaagccaatgtcgttagtctgtgtaactcagccgatagctggatgattgtg
cccaatatcaagcagaaccactacaccgtgcatggtctgcaaagtggcactaagtacatc
ttcatggtcaaggccatcaaccaggcaggcagccgcagcagtgagcctggaaagttgaag
acaaacagccagccatttaaactggatcccaaatctgctcatcgaaaattgaaagtgtcc
cacgacaacctgactgtagagcgtgatgagtcatcatccaaaaagagtcacacaccagaa
cgcttcaccagccaagggagctatggagtggctggaaatgtattcattgacagtggccga
cattactgggaagtggtcataagtggaagcacatggtatgccattggccttgcatacaaa
tctgccccgaagcatgaatggattgggaagaattctgcttcctgggccctctgccggtgc
aacaataactgggtggtgaggcacaacagcaaggaaattcccattgagccagccccccac
cttcggcgtgtaggcatcctgctggactatgataatggctccattgctttttatgatgct
ttgaactccattcacctctacaccttcgatgtggcatttgcgcagcctgtgtgccccacc
ttcactgtgtggaacaagtgtttgacgattattactggtcttcctatcccagaccatttg
gactgtacagagcagttgccttga
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