Nannospalax galili (Upper Galilee mountains blind mole rat): 103750117
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Entry
103750117 CDS
T03372
Symbol
Zbed1
Name
(RefSeq) zinc finger BED-type containing 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngi03000
]
103750117 (Zbed1)
04121 Ubiquitin system [BR:
ngi04121
]
103750117 (Zbed1)
Transcription factors [BR:
ngi03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
103750117 (Zbed1)
Ubiquitin system [BR:
ngi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
103750117 (Zbed1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
PaaX_M
hAT-like_RNase-H
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
103750117
NCBI-ProteinID:
XP_008851282
LinkDB
All DBs
Position
Un
AA seq
736 aa
AA seq
DB search
MEDKVPEVGPADGKPIPEAAPADRKPAEAKASKAPEAASADWKPAPEVPAGDRKLVAHPR
AKSKVWKYFGFDSDAEGCIVQWRKIYCRVCRAQIAYSGNTSNLSYHLEKNHPDQYCELVR
SNTEHMREAFASAYSRLKPDSGPGPCRSPQPPPSPPDAFAPPRSSLGYDTKRHRDITAAV
LGVICEGLFPASVVDEPTFRALLRAAEPRYELPGRKYFLQAVPEKYARVRDAVRKELGEA
AWCGVSADLWASPSHNRTYVTLAVHRLGVTSQGGLALTSRCLKTFEVPDDDDAAETVTRV
LYEVFVEWGLGSKVFAATTDFRKDLVQACSLLDVPVHLPCLASTLDAGIQQALRLPRLAA
LLARCRKLVRYFQGCSVARCLLYEKQRQHGLPRGMLVSDRVPGWGSTLLMLRRLKEQQFC
VAAVLLADSNNHHLMLEAAEYGTLDALLELLQPFRQVAEVLGSKYPTISMVKPLLHMLLN
TTLVAKDTECTDISTAKELIARELTRKYRDQPEVDMFLNVATFLDPRYKRLPFLSGFDRQ
RVELRVIEEAKAFLDRDGDRVRCAMTESPADGVPEDPPAKRFHAGACTEPPGTAIHSMLA
EIFCPAGATEDQEENHAQVVEELGNFKSQKVLGLSQDPLKWWSDRRALFPVLPRVLQKYW
CVVPTRVAPERLFGSAARVVSAKRNRLAPAHVDEQVFLYENARAVGDLEPEDEDEGDWGL
GPDGAGFLGARDAGFL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaagtcccggaagtagggccggcggacgggaagccgatcccggaagcggcc
ccggcagaccggaaaccggcggaggcgaaggcctccaaggccccggaagcggcctccgcc
gactggaagccggccccggaagtgcccgcgggggaccggaagctggtggcgcacccgcgg
gccaagagcaaggtgtggaagtacttcggcttcgactcggacgccgagggctgcatcgtg
cagtggcggaagatctactgccgcgtgtgccgggcgcagatcgcctactcgggaaacacg
tccaacctgtcctaccacctggagaagaaccacccggaccagtactgcgagctcgtgagg
agcaacaccgagcacatgcgcgaggccttcgcgtccgcctacagccggctcaagccggac
tcgggccccggcccctgccgctccccgcagccgccgccgtcgccgcccgacgcgttcgcg
cctccgcggtccagcctgggctacgacaccaagcgtcaccgggacatcaccgcggccgtg
ctgggcgtcatctgcgaggggctgtttccggcgtccgtggtggacgagccgaccttccgg
gccctgctgcgcgccgcagagccgcgctacgagctccccggccggaagtacttcctgcag
gccgtcccggaaaagtacgcgcgggtgcgggacgcggtgcggaaggagctgggcgaggcg
gcctggtgcggcgtctccgccgacctgtgggccagccccagccacaaccgcacgtacgtc
acgctggcggtgcaccggctgggcgtgacgtcacagggcggcctggcgctgacgtcgcgc
tgcctgaagacgttcgaggtccccgacgacgacgacgcggccgagaccgtcacgcgggtg
ctgtacgaggtgttcgtggagtggggcctgggcagcaaggtgttcgcggccaccacggac
ttccggaaggacctggtccaggcctgctcgctgctcgacgtcccggtgcacttaccctgc
ctggccagcaccctggacgccggcatccagcaggccctgcggctgccccgcctggccgcg
ctgctggcgcgctgccggaagctggtgcgctacttccagggctgctcggtggcccgctgc
ttgctgtacgagaagcagcggcagcacggcctgccgcggggcatgctggtgagcgaccga
gtccccggctggggcagcaccctgctcatgctgcggcgcctcaaggagcagcagttctgc
gtggcggccgtgctcctggcggacagcaacaaccaccacctgatgctcgaggccgccgag
tacggcaccctggacgcgctcctggagctgctgcagccgttccggcaggtggcggaggtg
ctgggctccaagtaccccaccatcagcatggtcaagccgctgctccacatgctgctgaac
accaccctggtcgccaaggacaccgagtgcaccgacatcagcaccgccaaggagctcatc
gctcgggagctgacccggaagtaccgcgaccagccggaagtggacatgttcctgaacgtg
gccaccttcctggacccgcgctacaagcggctgcccttcctgtccggcttcgacaggcag
cgggtcgaactccgcgtcatcgaggaggccaaggccttcctggaccgagacggcgaccgc
gtccgctgcgcgatgaccgagtccccggcggacggcgtccccgaggacccgccggccaag
aggttccacgcgggcgcgtgcaccgagccccccggcaccgccatccacagcatgctggcc
gagatcttctgccccgccggggcaaccgaggaccaggaggaaaaccacgcccaggtggtg
gaggaactcggcaatttcaagtcccagaaggtgctgggactgagccaagacccgctcaag
tggtggtcggaccgccgggccctgttcccggtgctcccccgggtgctgcagaagtactgg
tgcgtggtccccacgcgcgtggcccccgagcggctcttcgggtcagcggcccgggtggtc
agcgccaagcggaaccggctggcgccggctcacgtggacgagcaggtgttcctctacgag
aacgcgcgggccgtgggcgacctcgaacccgaggacgaggacgagggggactggggcctc
ggcccggacggtgcgggcttcctgggggccagagacgccggctttctgtag
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