Nannospalax galili (Upper Galilee mountains blind mole rat): 103751131
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Entry
103751131 CDS
T03372
Symbol
Vps16
Name
(RefSeq) VPS16, CORVET/HOPS core subunit
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04140
Autophagy - animal
ngi04148
Efferocytosis
ngi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103751131 (Vps16)
04148 Efferocytosis
103751131 (Vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103751131 (Vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngi04131
]
103751131 (Vps16)
Membrane trafficking [BR:
ngi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103751131 (Vps16)
Hops complex
103751131 (Vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
103751131
NCBI-ProteinID:
XP_008852713
UniProt:
A0A8C6RKS5
LinkDB
All DBs
Position
Un
AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELKDCLVAAAPYGGPIALLRNHWRKEKAA
SVRPVLEIYSASGILLASLLWKSGRVVSLGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAYRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTLCHDRVPHILLAVGPDLYILDHATCSTVTPAGLAPGVSSFLQMAVSFTYRHLALFTDT
GSIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGNAPESIQ
FVLDEDSYLVPELDGVRIFSRTTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDSFVH
MCQDLRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELDTLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMKLLRLQRRLQDELGGQFLDLPLHDTVTTLILGGHNKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAELSLVLSHCTGATDGATAEKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggattgctacactgcgaactggaatccgctcggggattctgccttttaccggaaatat
gagctgtacagcatggactgggacctgaaggaggaactcaaggattgcctcgtggctgct
gcaccctacgggggtcccattgctctgctaaggaaccactggagaaaagagaaagctgcc
agcgtgcggccagtgcttgagatctactctgcttctggcatactgctggctagcctgctg
tggaaaagtggacgtgtggtgtccctaggctggtcagccgaggaggagctgctctgcgtg
caggaagatggtgcagtactggtttatgggcttcatggtgacttccggagacatttcagc
atgggcaatgaggtacttcagaaccgagttctagatgcccgaatctttcacactgagttt
ggttctggggtagccatcctaacaggggcctatcgctttacactgagtgccaatgtgggt
gacctcaaactccgccggatgccagaggtgccaggtctacaaagtgcaccttcatgttgg
actacactgtgccatgacagagtgccacacattcttctggctgtaggacctgatctttac
atcctagaccatgctacctgttctacagtgacacctgctggcctagccccaggagttagc
agcttcctccagatggctgtatccttcacctaccgacacctggcactcttcacagacaca
ggcagcatctggatggggacagcatcactcaaggagaagctgtgtgagttcaactgcaac
atccgggcacccccaaagcagatggtctggtgtagccgtcctcgaagcaaagaaagggct
gttgtggtggcctgggagaggcggctgatggtggtgggcaatgcacctgaaagcattcag
tttgtgctagacgaggactcctacctggtacctgagcttgatggggtccgcatcttctcc
cgcaccacccatgaattcctgcatgaggtcccagtggccagtgaagagatcttcaaaatt
gcctcaatggctcctggagcactgctgttggaggcccagaaggaatatgagaaagagagc
cagaaagcagatgagtacctgcgggagatccaggagctggggcagctgactcaggctgtg
cagcagtgcattgaggctgcaggacacgagcaccaaccagacatgcagaagagtctgctc
agggcggcctcctttggaaagtgtttccttgacagatttccacctgacagctttgtgcac
atgtgtcaggacctgcgagtgctcaatgctgttagggactaccacattggaatccctctg
acctacagccaatacaagcagctcaccatccaagtgctgctggacaggcttgtattgcgg
aggctttaccccttggctatccagatatgcgagtacctgcgccttcctgaagtgcagggt
gtcagcaggatcctggcccactgggcctgttacaaggtacagcagaaggatgtgtcagat
gaggatgtagcacgggctattaatcagaagctgggtgacacacctggtgtctcatattcc
gacattgctgcacgggcctatggctgtggtcgtactgaactggccatcaagctgctagag
tatgagccacgatctggggaacaggtacctcttctcctaaagatgaagaggagcaagcta
gcactgagcaaggccattgagagtggggacactgacctggtgttcacagtgttgctgcac
ctgaagaatgaactgaaccgaggagactttttcatgactctcaggaatcagcccatggcc
ctgagtttgtaccgacagttctgtaagcatcaggagctagacacactgaaggacctttac
aatcaggatgacaaccaccaggagctgggcagcttccatatccgagccagctatgccgca
gaagagcgtattgaagggcgagtagcagctctgcagacagcagctgatgccttctacaag
gccaagaatgaatttgcagccaaggcaacggaggatcaaatgaagctcctgcggctgcag
cggcgtctacaagatgagctgggtggtcagttcctagacctgcctctacatgacacagtc
accactctcatccttggaggccataacaagcgtgcagagcagttggcacgtgactttcgc
attcctgacaagaggctctggtggctgaagctgacagccctggcagatttggaagattgg
gaggagctggagaagttttccaagagcaagaaatcacctattggctacctgccctttgta
gagatctgcatgaaacaacacaacaaatatgaagccaagaagtatgcttcccgtgtgggt
cctgagcaaaaggtcaaggctttgcttcttgttggggatgtggctcaggctgcagatgtg
gctatcgagcaccggaacgaggctgagctaagccttgtattgtcgcactgcactggagct
acagatggggccacagctgagaagattcagcgggccagagcacaagcccagaagaagtga
DBGET
integrated database retrieval system
