Nannospalax galili (Upper Galilee mountains blind mole rat): 103751503
Help
Entry
103751503 CDS
T03372
Symbol
Ppfia1
Name
(RefSeq) PTPRF interacting protein alpha 1
KO
K26226
liprin-alpha
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103751503 (Ppfia1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngi04131
]
103751503 (Ppfia1)
Membrane trafficking [BR:
ngi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103751503 (Ppfia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
HWE_HK
Motif
Other DBs
NCBI-GeneID:
103751503
NCBI-ProteinID:
XP_008853196
LinkDB
All DBs
Position
Un
AA seq
1254 aa
AA seq
DB search
MMCEVMPTISEAEGPPGGSGSQGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQET
LALTQGKLHEVGHERDSLQRQLSTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGATHKELMILKEQNNQKKTLTDGVLDVNHEQENTPSTNGKRSSD
GSLSHEEDLARVLELQEVIDKQSREQSQMKERLAALSSHVAELEEDLDTARKDLIKSEEM
NTKLQRDVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSIHRQT
EDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKSDPLSSGSSAKEAKLL
VRTAQLRKAEERHGNIEERLRQMEAQLEEKNQELQRARQREKMNEEHNKRLSDTVDRLLS
ESNERLQLHLKERMAALEDKNSLLREVENTKKQLEETQHEKDQLILNIDTLRAELDQMRL
RGPSLHHGRPHLGSVPDFRLPVADGHVDAYSGAVLRRPQKGRLAALRDEPSKVQTLNEQD
WERAQQASVLANVAQAFESDVDVSDGEDDRDPLLSSVDLLSPSGQADAQTLAMMLQEQLD
AINKEIRLIQEEKENTEQRAEEIESRVGSGSLDNLGRFRSMSSIPPYPASSLAGSSPPGS
GRSTPRRVPHSPAREVDRLGVMTLPSDLRKHRRKLPASREEVRDDKTTIKCETSPPSSPR
SLRLDRLHKGALHTVSHEDIRDLRNSTGSQDGPVSNPSSSSSSQDSLHKAPKKKGIKSSI
GRLFGKKEKGRPGPPGKESTGQAGVPETENSSQDALGLSKLGGQAEKNRKLQKKHELLEE
ARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISN
PLHRLKLRLAIQEIMSLTSPSAPPTSRTTTGNVWLTHEEMETLAATPQTEDEEGSWAQTL
AYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSF
QCGIMCLRRLNYDRKELERKREESQNETKDVLVWSNDRVIRWILSIGLKEYANNLIESGV
HGALLALDETLDFNALALLLQIPTQNTQARAVLEREFNHLLVMGTDRRFDEDDDKSFRRA
PSWRKKFRPKEVRGLAAGSAETLPANFRVTSSMSSPSVQPKKIQMDVYPHYFYR
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccgaccatcagcgaagcagaaggccccccaggaggaagcggg
agccaggggtcgggctccccatcacagccagatgccgattcacattttgaacaactcatg
gtgtctatgttggaagaaagggaccgccttcttgacacgctgagagagactcaggaaact
ctggcattaacccaggggaaactgcacgaggtcggtcatgaaagagactccttgcagagg
cagctcagcactgcactgccacaggagtttgctgcgctcactaaagaactcaatgtgtgc
cgtgagcagctcttggagagggaagaggagatcgctgagctgaaggcagaaaggaacaac
acccggctactgcttgaacacctggagtgcctggtctccagacatgagcgttccctgcgg
atgacagtggtgaagagacaggcccagtcccctgcgggcgtgtccagtgaggtggaggta
ctgaaagcgctgaagtccctgtttgaacaccacaaggccctggacgagaaggtgcgagag
cggctccgagtcgcactggagaggtgcagcttgttagaggaggagctgggtgccacccac
aaagagctaatgattctcaaggaacagaataatcagaagaaaacgctgacggatggagtg
ctggatgtgaaccatgagcaggagaacaccccgagcaccaacggcaagagatcttctgac
ggttccctgagccacgaggaagacctggccagagtgctggagctgcaggaagtcatagac
aagcagtcaagagagcagagccagatgaaggagcgtctggccgccctgtccagtcatgtg
gcagagctggaggaggatctggacacggccaggaaggaccttattaagtctgaagagatg
aacacaaagttgcaacgtgatgtccgagaagcgatggcccagaaggaggacatggaggag
aggatcaccactctggaaaaacgctacctcgctgcacagcgtgaagccacgtctgtgcat
gacctcaatgataaacttgaaaatgaaattgcaaataaagactccatacaccggcagaca
gaggacaagaaccgccagttgcaggagcgcctggagctggcagaacagaagctgcagcag
accctgcgtaaagctgagacactgccggaggtggaggcggagctggcccagagggtggct
gcgctctccaagtctgaccctttgtcttctgggagctctgctaaggaggctaaactgttg
gtgcgcactgcccagcttaggaaggccgaggagagacatggcaacatcgaggagaggctt
cggcagatggaagcacagctggaggagaagaaccaggagctgcagcgggcaaggcaaaga
gaaaagatgaatgaggaacataacaagcgcctctcagacaccgtggacaggcttctctcg
gagtccaacgagcggctacagctccatctgaaggagagaatggcggcactggaggacaag
aattctctgttacgggaagttgaaaatacaaagaagcagttggaagagacgcagcatgag
aaggaccagcttatcctgaacattgacaccctgagggctgagctggaccagatgagactg
agaggcccttcgcttcatcacggccgaccccacctgggaagcgtcccggacttcaggctc
cctgtggcggacgggcacgtagatgcctacagcggtgcggtgttgcggcgcccccagaag
ggccggctggcagcgctccgagacgagccgtcaaaggtgcagacccttaatgaacaggac
tgggagcgggcccagcaagccagcgtcctggcaaatgtggcacaggcatttgaaagtgat
gtggatgtgtctgatggagaagacgatagggatcctctgctcagctcggttgatctgttg
tctcccagtgggcaggctgatgcccagacactggccatgatgctccaggagcagctagac
gccatcaacaaagagatcaggttgatacaagaagaaaaagagaacacagagcagcgggca
gaggagatcgagagcagagtgggcagcgggagcctggacaatcttggtcgttttagatca
atgagctccattcccccctaccccgcttcctcactcgctggctcctcccctcctggcagc
ggtcggtccaccccaagaagggtccctcacagccctgctcgggaggtggacaggctgggc
gtcatgactctgcctagtgacttaaggaagcaccgtagaaagttaccagcttcccgagaa
gaggtacgagacgacaagacgaccataaaatgtgaaacctcccccccctcctccccacgc
tccctgcggttagacaggctgcacaagggcgcgctgcacacggtcagccacgaggacatc
agggacctgaggaactccacaggctcccaggatggccccgtgagcaatcccagcagcagc
agcagcagccaggactccctccacaaggccccgaagaagaagggcatcaaatcctccatt
ggacgcttgtttggcaagaaggaaaagggccgacctgggccgccgggcaaggaatcgaca
gggcaagctggtgttccggagacggagaattcatctcaggatgccttgggactcagtaaa
ctgggaggacaggctgagaagaatcgcaaacttcagaaaaagcacgagctactggaggag
gcccggaggcaaggcttgccatttgcgcagtgggatgggcccacggtggtggtgtggctg
gagctctgggttgggatgcctgcctggtacgtggctgcctgccgagcaaacgtgaagagc
ggagccatcatgtcggccctgtcggacaccgagatccagcgggagatcggcatcagcaat
cccctgcacaggctgaagctgcggctggccatccaggagatcatgtcactgaccagccct
tctgccccacctacgtccaggacgaccacaggaaatgtctggttaacacacgaagagatg
gaaacgctcgcagccacaccgcaaacggaagacgaggagggcagctgggctcagacgtta
gcgtatggggacatgaaccacgagtggatcggcaacgagtggctgcccagcctgggcctg
ccacagtaccgcagctacttcatggagtgcctggtagatgcccgcatgctggatcacctg
accaagaaggacctgcgagggcaactgaagatggtcgacagcttccacaggaacagtttc
cagtgtggaattatgtgcctgagaaggttaaattatgaccgaaaagaactggagagaaaa
agagaagagagccagaatgagacgaaagatgtgctggtttggagcaatgaccgggtgatt
cgctggatcctgtccatcggccttaaagagtatgccaacaacctaatagagagtggcgtg
cacggcgcacttctggccttggatgagaccttagatttcaacgccctggcactgctgctg
cagattcccacacagaacactcaggcacgagctgtcttggaaagagagttcaaccacctt
ttggtcatgggaacggacagaaggtttgacgaagacgatgataaaagcttcaggagggcg
ccttcatggagaaagaagttccgaccaaaggaggtccgaggcctggctgctggctccgcg
gagacgcttcctgccaacttccgggtcacttcctctatgtcctcgccctctgtgcagcca
aagaagattcagatggatgtttacccgcactacttctaccggtga
DBGET
integrated database retrieval system
