Nannospalax galili (Upper Galilee mountains blind mole rat): 103751684
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Entry
103751684 CDS
T03372
Symbol
Col4a1
Name
(RefSeq) collagen type IV alpha 1 chain
KO
K06237
collagen type IV alpha
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04151
PI3K-Akt signaling pathway
ngi04382
Cornified envelope formation
ngi04510
Focal adhesion
ngi04512
ECM-receptor interaction
ngi04820
Cytoskeleton in muscle cells
ngi04926
Relaxin signaling pathway
ngi04933
AGE-RAGE signaling pathway in diabetic complications
ngi04974
Protein digestion and absorption
ngi05146
Amoebiasis
ngi05165
Human papillomavirus infection
ngi05200
Pathways in cancer
ngi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103751684 (Col4a1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103751684 (Col4a1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103751684 (Col4a1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103751684 (Col4a1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103751684 (Col4a1)
09154 Digestive system
04974 Protein digestion and absorption
103751684 (Col4a1)
09158 Development and regeneration
04382 Cornified envelope formation
103751684 (Col4a1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103751684 (Col4a1)
09162 Cancer: specific types
05222 Small cell lung cancer
103751684 (Col4a1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103751684 (Col4a1)
09174 Infectious disease: parasitic
05146 Amoebiasis
103751684 (Col4a1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103751684 (Col4a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngi04147
]
103751684 (Col4a1)
00536 Glycosaminoglycan binding proteins [BR:
ngi00536
]
103751684 (Col4a1)
Exosome [BR:
ngi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103751684 (Col4a1)
Glycosaminoglycan binding proteins [BR:
ngi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103751684 (Col4a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103751684
NCBI-ProteinID:
XP_008853415
UniProt:
A0A8C6RCN7
LinkDB
All DBs
Position
Un
AA seq
1669 aa
AA seq
DB search
MGPRLSVWLLLLLTALLLHEERSRAAAKGDCGGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPHGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFSGNPGPPGLPGMKGDPGEILGHIPGAPLKGERGFPGA
PGTPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGSSFQGPKGDKGDQGVSGPP
GVPGQAQAKEKGDFAPTGEKGQKGEPGFQGPPGAGEKGEPGKPGPRGKPGKDGEKGERGS
PGFPGDSGYPGLPGRQGPQGEKGEAGLPGPPGNGFGPGLLGEKGDRGYPGSPGLRGEPGP
KGFPGIQGRPGPPGFPIPGQAGAPGFPGERGEKGDQGVPGVSLPGPSGRDGIPGLPGPPG
PPGQPGHTNGIVECQPGPPGDQGPPGTPGHPGLTGEVGEKGQKGEGCLACDTEGLRGPPG
PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGAPGLMGQPGAKGEPGEIFFDMRLK
GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSIGLKGERGPPGGVGFPGSRGDI
GPPGPPGYGPIGPIGDKGQAGFPGGPGSPGLPGPKGEAGTVVPLPGPPGAAGLPGSPGFQ
GPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFNG
LPGNPGVQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEHGLIGPPGLQGI
RGDPGPPGVQGPAGPPGAPGIGPPGAMGPPGGQGPPGSSGLPGVKGEKGFPGFPGLDMPG
PKGDKGAQGLPGLTGQSGLPGLPGQQGTPGVPGFPGTKGEMGVMGTPGQPGSPGPAGTPG
LPGVKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG
PTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGQQGAPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQGLAGFPGSPGE
KGEKGSTGIPGMPGSPGPKGSPGSIGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGT
PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFTGTKGDKGSKGEVGFPGLAGSP
GIPGTKGEQGFMGPPGPQGQPGLPGTPGHPVAGPKGDRGPQGQPGLPGHPGPMGPPGLPG
LDGLKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGQKG
LPGLQGVKGDQGDQGIPGPKGLQGPPGPPGRYDVVKGEPGLPGPEGPPGLKGLQGPPGPK
GQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTTDDPPCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPISGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPQCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcagcgtctggctcctgctgctgctcacagcccttctgctccacgag
gagcgcagccgggccgctgcgaagggtgattgtggtggctccggctgtggaaaatgtgac
tgtcatggtgtgaagggacaaaagggagaaagaggccttccagggttacaaggtgtcatt
gggtttcctgggatgcaaggacccgaggggccacacggacctccaggacaaaagggtgac
actggagaacctggacttcctggcacaaaagggacaagaggaccccctggagcatctggc
taccctggaaacccaggactgcctggtattcctggccaagatggtccaccaggtccccca
ggtatcccaggatgcaatggtacaaagggagagagagggccactcgggcctcccggcttg
cctggattcagtggaaaccccggaccaccagggttaccaggaatgaagggagatcctggt
gagattctcggccacattcctggagcaccgttgaaaggcgagagaggatttcctggtgcc
ccagggacgccgggctcaccaggattgccaggactccagggacctgtcggccctccagga
tttactggaccaccaggtcctccaggccctcctggccctcctggagaaaaggggcagatg
ggctctagcttccaaggaccaaaaggtgacaaaggcgatcaaggggtcagtggcccccca
ggagtacctggacaggcacaagctaaagaaaaaggagactttgctccaacaggagaaaag
ggtcagaaaggtgaacctggattccagggaccaccaggggctggagagaaaggcgaacct
ggaaaaccagggcctcggggaaaacctggaaaagatggagaaaaaggagaaaggggaagt
ccgggtttccctggcgattcggggtacccaggactcccaggccggcagggccctcaggga
gagaaaggtgaagctggacttccgggcccccctggaaatgggtttggccctgggcttctg
ggagaaaaaggagatcgaggttaccctggatcacctgggttaagaggagagccaggccct
aaaggtttccctggaatacaaggccgaccaggtcctccaggcttccctataccagggcag
gctggtgctccgggcttccctggtgaaagaggagaaaaaggtgaccaaggagttccaggc
gtgtctttgccaggtcccagtggaagagacgggatcccaggtcttcctggccctcctggc
cctcctgggcagccaggccacacaaatggcattgtggagtgtcagcccggaccacccggg
gatcagggtcctcctgggactccagggcacccaggattgactggtgaagttggagaaaag
ggtcagaaaggagagggctgcctggcctgtgatacagaaggacttcgaggccccccaggg
ccacaggggcccccaggagagataggttttccaggacagcctggggccaaaggcgaccga
ggcctgcctggcagggatggtcttgaaggattgccggggcctcaaggtgcaccaggactc
atgggccagcctggagccaagggagagcctggagagatattttttgacatgcgacttaaa
ggtgacaaaggagacccaggtttcccaggacagcccggcatgccaggaagagccgggtcc
cctggaagagatggccacccaggacttcctggccccaaaggctccccgggttccataggc
ttgaaaggagagcgtggtcctcctggaggagttggcttccctggcagtcgtggcgacatt
ggcccccctgggcctccaggatatggtcctattggtcccattggtgacaaaggacaagcg
ggttttccaggaggacctgggtccccaggcctgccaggtccaaagggtgaagcaggaacg
gtagttcctctacctggccctcctggagcagcaggacttccagggtcccctgggttccaa
gggcctcaaggtgaccgaggcttcccaggaaccccaggacggccaggcatcccaggagag
aagggtgctgtgggccagccagggattggatttcctgggcctcctggccccaaaggtgtt
gatggcttgcctggagacatgggacctcctgggactccaggtcgccctggatttaatggc
ttacctggcaacccaggggtgcagggccagaagggagagcctggcattgggctgccagga
ctcaaagggcagccaggtcttccaggcattcctggcacacctggagagaagggcagtatc
gggggaccaggtgttcctggagaacatggcttgatcggccctcctggacttcaggggatc
agaggtgacccaggacctcctggagttcaaggccccgcaggaccaccaggagctccagga
ataggacctcctggagccatgggtccccccggaggacagggaccaccagggtcatcaggt
ctacctggagtgaaaggagagaaaggtttccctggattccctggactggacatgcctggc
cctaaaggagataaaggggctcaaggacttcctggtctcaccggacagtcagggctccct
ggtcttcctggacaacagggtactcctggagttccagggttcccaggtactaaaggagaa
atgggtgtcatggggacccctgggcaaccaggctcaccaggaccagcaggcaccccagga
ttacctggagtaaaaggggaccatggcttcccgggctcctcaggacccaggggagaccct
ggctttaaaggcgataaaggggacgtcgggctccctggcaaaccaggatctatggataaa
gtggacatgggcagcatgaagggacagaagggagaccaaggagagaaaggacaaattgga
cctactggtgataaaggttcccgaggagatcctggaaccccaggagtgcctgggaaggat
ggacaggcagggcatcctggacagccgggtcctaaaggcgacccaggtctcagcggcacg
ccaggctcccctggactccctggacccaaaggatcagttggtggaatgggcttgccagga
acacctggagaaaaaggtgtgcccggcatccccggccagcagggtgccccaggctcacct
ggagaaaagggggcaaaaggagagaaaggacagtcaggtctgcctggcattgggattcct
gggcgtcctggtgacaagggagaccaggggctggcgggtttcccaggaagccctggagag
aaaggagagaaaggcagcactgggatcccaggcatgccggggtccccaggtccaaagggg
tctccagggagcatcggctatccaggaagccctgggttgcctggagaaaaaggagacaaa
ggcctcccaggactggacggtattcctggagtcaaaggagaagcaggtctccctggcacg
cctggccccacgggcccagctggccaaaaaggagagcctggcagtgatggaatcccaggg
tccgcaggggagaagggtgaaccaggtctacctggaagaggattcccaggctttacaggg
accaaaggagacaaaggttccaagggtgaagtgggtttccctggattggctggaagtcca
ggaattcccggaaccaaaggcgagcaaggattcatgggtcctccgggccctcaaggacag
ccgggtttacctggcactcctggccaccctgtggcggggcccaaaggagaccgtggccct
cagggtcaacctggcctgccaggacatccgggtcccatggggcctccagggctccctggg
ctagatggactgaaaggtgacaagggaaatccaggctggccaggtgctcctggggttcca
gggcccaagggagacccaggattccaaggcatgccgggaattggtggctctccagggatc
acaggttctaagggagatatgggaccaccaggagtcccaggattccaaggtcagaaaggt
cttcctggcctccagggagtgaaaggagatcagggagatcaaggcatacccggacctaaa
ggtctccagggcccccctggacccccaggtcgctacgatgttgtcaaaggagagccaggg
ctccctggtcccgagggtcccccaggtctaaaaggacttcagggaccaccaggccccaaa
ggacagcaaggcgtgacaggctctgtgggcttacctggacccccaggtgttcctgggttt
gatggtgctcctggccagaaaggagagactggaccatttgggcctcctggtccaagaggg
tttcctggtccaccaggccctgatgggctgccaggatccatgggacccccaggtacccca
tctgtggaccacggtttccttgtgaccaggcatagtcagacaaccgatgacccaccatgt
cctcccgggaccaaaattctttaccatgggtactctctactctatgtgcaaggcaatgaa
agggcccatggccaggacttaggcacggccggcagctgcctacgtaagttcagcactatg
cccttcctcttctgcaacatcaacaacgtctgcaactttgcctcgaggaacgactattcc
tattggctatccacaccagagcctatgcccatgtccatggcgcccatctctggggacaac
atccgccccttcattagcaggtgtgcagtatgcgaggcaccagccatggtgatggctgta
cacagtcagaccattcagattccacagtgccccaatggttggtcctcgctatggattggc
tattcctttgttatgcataccagcgctggtgctgaaggttctggccaagccctcgcatcc
cctgggtcctgtctggaagagtttagaagtgccccattcatcgagtgccatggccgaggg
acctgtaattactatgcaaatgcttacagcttttggctcgccaccatagagagaagtgag
atgttcaagaagcccacgccatccaccttgaaggctggggagctgcgcacacatgtcagc
cgctgtcaagtgtgtatgagaagaacatga
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integrated database retrieval system
