Nannospalax galili (Upper Galilee mountains blind mole rat): 103751847
Help
Entry
103751847 CDS
T03372
Symbol
Ddx39a
Name
(RefSeq) DExD-box helicase 39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngi03041
]
103751847 (Ddx39a)
Enzymes [BR:
ngi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103751847 (Ddx39a)
Spliceosome [BR:
ngi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103751847 (Ddx39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103751847
NCBI-ProteinID:
XP_008853627
UniProt:
A0A8C6QVD6
LinkDB
All DBs
Position
Un
AA seq
427 aa
AA seq
DB search
MAEQDVENELLDYDEDEEPQAPQETTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPISGQVSVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVR
SRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaggatgtggaaaatgagcttttggattatgacgaagatgaagagccccag
gcgcctcaggagaccactccagctccccccaagaaagatgtcaaaggatcttacgtctcc
atccacagctctggcttcagagactttctgctaaagccagagctcctgagggccatagtg
gactgtggctttgagcatccctcagaggtccagcatgagtgtattccccaggccatcctg
ggcatggacgtcctgtgtcaggccaagtctgggatgggcaagactgccgtgttcgtgctg
gccaccctgcagcagattgagcccatcagtggccaggtatcagtactggtcatgtgccac
acaagggagctggccttccagatcagtaaggagtatgagcgcttctccaagtacatgccc
agtgtcaaggtatctgtgttctttgggggcctctctatcaagaaggatgaagacgtgttg
aagaagaattgtccccatgtcgtggtggggacaccaggccggatcctggcacttgtgcgg
agcaggagcctcaacctgaggaatgtgaaacactttgtgctggatgagtgtgacaagatg
ctggagcagctcgacatgcggcgggacgtgcaggagatcttccgcctgacaccccacgaa
aagcagtgcatgatgttcagtgctaccctgagcaaggagatccggccagtctgcaggaag
ttcatgcaggatcccatggaggtgtttgtggatgatgagaccaagctcacactgcatgga
ctgcagcagtattacgtcaagctcaaggacagtgagaagaaccgcaagctcttcgacctc
ctagatgtgctggagtttaaccaggtggtgatcttcgtcaagtccgtacagcgctgcatg
gctctggcccagctcctagtggagcagaacttcccagccatcgccatccaccgtggcatg
gcccaagaggagcgcctgtctcgctaccagcagttcaaagacttccagcggcggattttg
gtggccaccaatctgtttggccgagggatggacattgagcgcgtcaacatcgttttcaac
tatgacatgcctgaggactcagatacgtacctccaccgagtggctcgtgctggtcgcttt
ggtaccaaaggcctggcggtcactttcgtatctgatgagaatgatgccaaaattctcaat
gatgttcaggaccggtttgaagtgaatgtggcagagcttcctgaagaaattgacatctcc
acatacattgagcagagccggtaa
DBGET
integrated database retrieval system
