Nannospalax galili (Upper Galilee mountains blind mole rat): 103751928
Help
Entry
103751928 CDS
T03372
Symbol
Prpf39
Name
(RefSeq) pre-mRNA processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngi03041
]
103751928 (Prpf39)
Spliceosome [BR:
ngi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103751928 (Prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
TPR_MalT
ANAPC5
PLCC
Motif
Other DBs
NCBI-GeneID:
103751928
NCBI-ProteinID:
XP_008853761
LinkDB
All DBs
Position
Un
AA seq
698 aa
AA seq
DB search
MQNSHMDEYRNSDNGSTGNSSEVVVEQSADFSTEIMNVTEMEQSPDGSPCVDASTEENEI
ANTVDLPVAVTETEANFPPEFEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAARKAFDK
FFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDLD
DPETNSTVRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAIYDRILGIPTQLY
SHHFQRFKEHIQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPA
KLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYL
EFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKK
PMVHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQD
AIRNARSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYNC
DLKQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKE
QDTLKRKAENGSEEPEEKKIHTEDTSAAAQIIDGDLQANQAAYNYSAWYQVSPWNYNTLL
LSVTRNTNLVGFFLGGAVVLRYLQPQLSSLCRSGWSHS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggatgagtacaggaattctgataatggcagcacaggcaacagt
tcagaggtagtggtagagcaatctgctgatttcagtactgagattatgaatgttacggaa
atggaacagtcacctgatggctctccttgtgtggatgcatctacagaagaaaatgaaatt
gcaaacactgtggatcttccagtggcagtgacagaaacagaagcaaatttccctccagaa
tttgaaaagttttggaaaactgtagaaaataatcctcaggattttacaggctgggtatat
ttgcttcagtacgtagaacaggagaatcacttgatggctgccaggaaagcatttgacaag
tttttcatacactacccgtattgctacggttactggaaaaaatatgcagaccttgaaaag
cgacatgacaacattaaacaatcagatgaggtttatcgtcgggggcttcaggcaatacct
cttagcgttgacctttggatacattatatcaacttcttaaaagaaacattggaccttgat
gatcctgagacaaacagtacagtaagaggaacttttgagcatgctgttctagctgcagga
acagattttcgatctgacaaactgtgggaaatgtatataaactgggaaaatgaacaggga
aatctgagagaagttacagctatatatgatcgtattcttggtattccaacccagctgtat
agtcatcattttcagagatttaaagaacatatacagaataacttgcctagagatctttta
actggtgaacagtttattcagttgagaagggaattagcttctgtaaatggacatagtggt
gatgatggacctcctggtgatgaccttccatcaggaattgaagacataactgatccagca
aagctaattactgaaattgaaaacatgagacatagaatcattgaaattcatcaagaaatg
tttaattataatgagcatgaagttagtaagaggtggacatttgaagaaggtattaaaaga
ccttattttcatgtgaaaccattggaaaaggcccaactaaaaaactggaaagaatactta
gaatttgaaattgaaaatgggactcatgaaagagttgtggttctctttgaaagatgtgtc
atatcatgtgccctctatgaggagttctggattaagtatgccaagtacatggaaaaccat
agcattgaaggagtgaggcatgtcttcagcagagcttgtactattcatctcccaaagaaa
cccatggtgcatatgctttgggcagcttttgaggaacagcaggggaatattaatgaagcc
aggaatatcttgagaacatttgaagaatgtgtcctaggattggcaatggttcgtttgcga
agagtaagtttagaacgacggcatggaaatatggaagaagctgaacatttgcttcaagat
gctataaggaatgccagatcaaataatgaatcatcattttatgctatcaaactagcccga
catcttttcaaaatacaaaaaaatcttccaaaatcaagaaaggtgcttttggaagcaatt
gaaagagataaagagaatacaaagttatacctcaatttacttgaaatggaatacaattgt
gacctcaaacaaaatgaagaaaatattctcaattgttttgacaaagctatacatggttca
ttacctattaaaatgagaattacattttctcagagaaaagtggaatttcttgaagatttt
ggttcagatgttaataagcttctgaatgcttatgatgaacatcaaacactcctaaaagaa
caggatactttaaaaagaaaagctgaaaatggatcagaagaaccagaagaaaagaaaata
catacagaagatacatcagcagcagcacagataattgatggggatttacaggcgaatcaa
gctgcatataattacagtgcctggtatcaggtgagtccatggaattacaacactttattg
ttaagtgtcactagaaacacaaatttggtggggttttttttggggggggctgttgttttg
aggtacctgcagccacagctgagctcactatgtagatcaggctggtctcactcttag
DBGET
integrated database retrieval system
