Nannospalax galili (Upper Galilee mountains blind mole rat): 103752129
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Entry
103752129 CDS
T03372
Symbol
Polr2a
Name
(RefSeq) RNA polymerase II subunit A
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03020
RNA polymerase
ngi03420
Nucleotide excision repair
ngi05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103752129 (Polr2a)
09124 Replication and repair
03420 Nucleotide excision repair
103752129 (Polr2a)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
103752129 (Polr2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngi03021
]
103752129 (Polr2a)
03400 DNA repair and recombination proteins [BR:
ngi03400
]
103752129 (Polr2a)
Enzymes [BR:
ngi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103752129 (Polr2a)
Transcription machinery [BR:
ngi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103752129 (Polr2a)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103752129 (Polr2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
103752129
NCBI-ProteinID:
XP_008854027
UniProt:
A0A8C6QED2
LinkDB
All DBs
Position
Un
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggagtcctgagtcctgatgagttgaagcggatgtctgtaacagagggtggc
atcaaatacccagagacaactgagggaggccgccccaagcttgggggcctgatggatcca
aggcagggagtgattgagcggactggccgttgtcaaacatgtgcaggaaacatgacagag
tgtcctggccactttggccacatcgaactggccaaacctgtatttcatgtgggcttcctg
gtgaagacaatgaaggttttgcgctgtgtctgtttcttctgctccaaactgcttgtggac
tctaacaaccccaaaatcaaggacatcctggctaagtctaaagggcagccaaagaagcgg
ctcacacatgtctatgacctttgcaagggcaaaaacatttgcgagggtggggaggagatg
gacaacaagtttggcgtggagcagcctgagggtgatgaggatctgaccaaagagaagggc
catggtggctgtgggcggtaccagcctcgaattcggcgctctggcctggagttgtatgct
gaatggaagcatgttaatgaggactctcaagagaagaaaatcttgttgagtccagaacga
gtacatgaaatcttcaaacgcatctcagacgaggagtgttttgtgctgggcatggagcct
cgctatgcccggcctgagtggatgattgtcacagtgctgcctgtgcctcctctgtctgtg
cggcctgctgtggtgatgcagggttcagcccgaaaccaggatgacctaactcacaaactg
gctgatattgtgaagatcaacaatcagctgcgacggaatgagcagaatggcgcggctgcc
catgtcatcgcagaggatgtgaagctcctccagttccatgtggccaccatggtggacaac
gaattgcctggcttgccccgtgccatgcagaaatctggccgtcccctcaagtccctaaag
caacggttgaagggcaaggaaggacgggttcgaggaaacctgatgggcaagcgagtggac
ttctcagcccgcactgtcattacccctgatcctaacttgtccattgaccaagttggtgtg
ccccgttccattgctgccaacatgacatttgcagagattgttacccccttcaacattgac
agacttcaggaattagtacgcagggggaatagccagtacccaggggccaagtacatcatt
cgggacaacggtgatcgaattgacttgcgtttccaccctaagcccagtgacctgcacctg
cagactggctataaggtggaacggcacatgtgtgatggggacattgttatcttcaatcgt
cagccaactttgcacaaaatgtccatgatggggcatcgggtccgcatcctcccctggtct
acttttcgcttgaatctcagtgtgacaactccatacaatgcagactttgatggggatgaa
atgaacttgcacctgccacagtctctggagacaagggcagagatccaagagttagccatg
gtgcctcgaatgattgtcactccccagagcaatcgacctgtcatgggtattgtgcaggac
acgctcacagcagtacgaaaattcactaaaagggatgtcttcctggagcggggtgaagtg
atgaacctcctaatgttcctgtctacatgggatgggaaggtcccacagccagccatcctc
aagccccggcccttgtggacaggcaaacagatcttctccctcatcatacctggccacatc
aattgtattcgtacacacagcacccatcctgatgacgaagacagcggcccttacaagcac
atctctcctggggacaccaaagtggtagtggagaatggggagctgatcatgggcatcctt
tgtaagaagtctctaggcacctcagcaggctctttggtccacatctcctacctagagatg
ggtcatgacatcactcgcctcttctactccaacattcagactgtcattaacaactggctt
ctaatcgagggtcatactattggcattggggactccattgctgattctaaaacttaccaa
gacattcagaacactattaagaaggccaaacaggatgtaatagaggtcattgagaaggct
cataacaatgagctggaacccaccccaggaaacacattgcgtcagacatttgagaatcag
gtgaatcgcattctcaatgatgctcgagacaaaactggctcctctgcacagaaatccctg
tctgaatacaacaacttcaaatctatggtggtgtctggagctaaaggttccaagatcaac
atctctcaggtcattgctgttgttggacagcagaacgtggagggcaaacggatcccattt
ggatttaagcaccggactcttccacatttcatcaaggatgattatggtcctgagagccga
ggctttgtagagaactcatacttagctggtctcacacccactgagttcttcttccatgcc
atggggggacgtgagggtctcatcgacacagctgtcaagactgctgagactgggtatatt
cagcggagactgataaagtccatggagtcagtgatggtgaaatatgatgcaactgtgcgg
aactccatcaaccaggtggtacaactgcgctatggagaggacggtctagcaggcgagagc
gttgagttccagaatctggctacacttaagccttctaacaaagcttttgagaagaagttt
cggtttgattataccaatgagagggccctgaggcgcactctgcaggaggatctggtaaag
gatgtgctgagcaatgcacatatacagaatgaactagaacgggaatttgaacggatgcgt
gaggatcgggaggtgctcagggtcatcttcccaactggagacagcaaggtggtcctccct
tgtaacctcctgcgcatgatctggaatgctcagaaaatcttccacatcaaccctcgcctc
ccctcagacctgcaccctatcaaagtggtagagggagtcaaggaattgagcaagaagctt
gtgattgtgaatggggatgacccactaagtcggcaggctcaggaaaatgccacattgctc
tttaatatccacttacgatccacactctgctctcgacgcatggctgaggagtttcggcta
agtggagaggcctttgactggctgcttggggagattgagtccaagttcaaccaagccatt
gcccatccaggagaaatggtgggagctctggctgcacaatcccttggagaacctgccact
caaatgaccctgaataccttccactatgctggtgtgtctgccaagaatgtgactctgggt
gtacctcgacttaaggagctcatcaacatttccaagaagccaaagaccccctcactcact
gtcttcctgctgggccagtctgctcgagatgctgagcgggctaaggacattctgtgccgc
ttggaacacacaacattgaggaaggtgactgccaacacagccatctactatgaccccaac
ccccagagcacagtggtggcagaagatcaggagtgggtgaacgtttactatgagatgcct
gactttgatgtggcccgaatatccccctggcttctgcgtgtggagctggaccggaagcac
atgactgaccggaagctcaccatggagcagattgctgagaaaataaatgcaggttttggc
gatgatttgaattgcatctttaatgatgataatgcagagaagctggtccttcgtatccgc
attatgaacagtgatgaaaacaagatgcaagaggaagaagaggtggtggacaagatggat
gatgatgttttcctgcgatgcattgagtccaacatgctgacagatatgaccctgcagggc
attgagcagatcagcaaggtatacatgcatttacctcagacagacaacaagaagaagatc
atcatcacagaggatggggagttcaaggccctgcaagagtggatcttggagactgatggc
gtgagcttgatgcgggtgttaagcgaaaaggatgtggaccctgtgcgcaccacgtccaat
gatattgtggaaatttttacggtgctgggcattgaggctgtgcggaaggccctggagagg
gaattgtaccatgtcatctcttttgatggttcctatgtcaattatcgacatttggctctt
ttgtgtgatactatgacctgtcgtggccacttgatggccattactcgacatggggtcaat
cgtcaggacacagggccactcatgaagtgttcctttgaggaaacggtggatgtgcttatg
gaagcagctgctcatggggagagcgaccccatgaagggagtctctgagaatatcatgcta
ggtcagcttgctccagctggcactggctgctttgacctcctgctggatgcagagaagtgc
aaatacggcatggagattcccaccaatatccctggcttgggggctgctggacccactgga
atgttctttggctctgcacccagtcccatgggaggaatatctcctgccatgacaccctgg
aaccaaggtgcaaccccagcctacggtgcctggtccccaagtgttgggagtgggatgacc
ccaggagcagctggtttctcacccagtgctgcatctgatgccagtggcttcagcccaggt
tactcccctgcctggtctcccacaccaggctctccaggctcccctggaccttcaagccca
tacatcccctcaccaggtggtgctatgtctcccagctactcaccaacatcacctgcctat
gagccacgctcccctggaggctatacaccccagagtccttcctactctcctacttcccct
tcctactctccaacctctccatcctattctccaactagtcccaactacagccctacctca
cctagctactcaccaacatcccctagttactctccaacatcccctagctactcaccaacc
tcccctagctactcgccaacctctccaagctactcgccaacctctccaagctattcgcca
acatcacctagctactccccaacttcccccagctactccccaacatctcctagctattca
ccaacatctcctagttactcaccaacttcccccagctactccccaacctcccccagttac
tcaccaacgtctccaagctattcgcctacatctccaagctactcaccaacttctcctagt
tattcacctaccagccccaactactctccaactagtccaaattacaccccaacatcaccc
agctacagcccgacatcacccagctactcacctactagtcctaactacacaccgactagc
cctaactatagccctacttctccaagctattccccaacttcacccagctactcccctacc
tctccaagctattccccttcaagtccacggtacacaccacagtctccaacctatacccca
agctctccgagctatagccccagctctccaagctacagccccacttcacccaagtatacc
ccaaccagtccttcctatagtcccagctcaccagagtataccccaacctctcccaagtac
tcacctacaagccctaaatattcacctacttctcccaaatattctcctaccagccccacc
tactcacctactacaccaaaatattcgccaacttctcctacttactcaccaacctctcca
gtctataccccgacctcccccaagtactcacctactagccccacttactcacccacttct
cccaagtattcacccaccagccctacctattcacccacctctcccaaaggttctacctac
tcgcccacttcccctggctactcacccactagccccacctacagcctcaccagcccagcc
atcagcccagatgacagtgatgaggaaaactga
DBGET
integrated database retrieval system
