Nannospalax galili (Upper Galilee mountains blind mole rat): 103752196
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Entry
103752196 CDS
T03372
Symbol
Chrne
Name
(RefSeq) cholinergic receptor nicotinic epsilon subunit
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103752196 (Chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngi04040
]
103752196 (Chrne)
Ion channels [BR:
ngi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
103752196 (Chrne)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
103752196
NCBI-ProteinID:
XP_008854139
UniProt:
A0A8C6RTQ6
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All DBs
Position
Un
AA seq
492 aa
AA seq
DB search
MARALLSGLLLLGLLGLDEGKNEELNLYHHLFDNYDRDCRPVRRPEDTVTISLKVTLTNL
ISLNEKEETLTTNVWIGIDWHDYRLNFSKNDFAGAEVLRVPSELVWLPEIVLENNIDGQF
GVAYECNVLVYEGGYVSWLPPAIYRSTCAVEVAYFPFDWQNCSLIFRSQSYTAEEVEFVF
AVDDDGKPINNIDIDTEAFTENGEWAIDFCPGEIRRYEGGSADSPRETDIIYTLIIRRKP
LFYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLS
VPLLGRYLIFVMVVATLIVMNCVIVLNVSLRTPTTHAASPRLRHVFLELLPRLLGSSPPP
EAPRAAPARRASSVGILLRAEELILKKPRSELVFEGQRHRHGAWTAPLCQSLGAAAPEIR
SCVDAVNFVVESTRDQEATGEEVSDWVRMGKALDNICFCAALVLFSVGSSFIFLGGYFNQ
VPQLPYPPCIQP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggctctgcttagtggcctgcttctcttggggctccttggcctggatgagggg
aagaacgaggagctcaacctttatcaccatctctttgataattatgaccgagactgccgg
ccagttaggaggccagaggacacggtcaccatcagcctcaaggtcaccctaaccaacctc
atctcactgaacgaaaaggaggagactctcacaaccaatgtctggattggaattgactgg
catgattaccggctcaacttcagcaagaacgactttgcaggcgcagaagtcctgcgggtc
ccttcagaacttgtgtggctgccagagattgtgctagagaacaatattgatgggcagttt
ggcgtggcttacgaatgcaacgttctggtctacgagggaggctatgtgagctggttgccc
cctgccatctaccgcagcacctgtgcagtggaggtcgcttacttcccctttgactggcag
aactgctctctcattttccgctctcaatcctacactgctgaagaggtggagttcgtcttt
gcagtggatgacgatggcaagcccatcaacaacatcgacattgacacggaagcattcact
gaaaatggagagtgggccattgacttctgcccaggcgagattcgccgctacgaaggaggc
tcagcagacagcccgagagaaactgacatcatctatacactcatcatccgccgcaagccg
ctcttttatgtcattaacatcatcgtgccctgtgtgctcatttcgggcctggtgctgctt
gcttactttctgcccgcacaggccgggggtcagaaatgcaccgtctctatcaacgtcctg
ctcgcccagaccgtcttcttgttcttaattgcccagaaaattccagagacttctctgagc
gtgccgctgctgggcaggtatcttattttcgtcatggtggttgccacgctcattgtcatg
aattgcgtcattgtgctcaacgtgtctttgcggacacccactactcatgccgcatcaccg
aggctgcgccatgtctttttagagttgctgccacgcctcctgggctcgagtccgccccca
gaagctccgcgggccgcaccagcaaggcgggcttcctcggtgggcattctgctccgcgcg
gaggagctcattctgaaaaagccgcggagcgagctcgtgtttgaggggcagaggcaccgg
catggagcctggactgctcccctctgccagagcctaggtgctgcagcccctgaaatccgc
tcctgtgtggatgctgtgaactttgtggtcgagagcacacgtgaccaggaagccactgga
gaggaagtgtctgactgggtgcgtatggggaaggcccttgacaacatctgcttttgtgct
gccctggtgctcttcagtgttggttccagcttcatcttccttgggggttacttcaaccaa
gtgcctcaactcccctacccaccgtgtatccaaccttga
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