Nannospalax galili (Upper Galilee mountains blind mole rat): 103752516
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Entry
103752516 CDS
T03372
Symbol
Trpc1
Name
(RefSeq) transient receptor potential cation channel subfamily C member 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04360
Axon guidance
ngi04724
Glutamatergic synapse
ngi04726
Serotonergic synapse
ngi04929
GnRH secretion
ngi04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
103752516 (Trpc1)
09154 Digestive system
04972 Pancreatic secretion
103752516 (Trpc1)
09156 Nervous system
04724 Glutamatergic synapse
103752516 (Trpc1)
04726 Serotonergic synapse
103752516 (Trpc1)
09158 Development and regeneration
04360 Axon guidance
103752516 (Trpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngi04040
]
103752516 (Trpc1)
Ion channels [BR:
ngi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103752516 (Trpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
103752516
NCBI-ProteinID:
XP_008854560
UniProt:
A0A8C6WDC7
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All DBs
Position
Un
AA seq
809 aa
AA seq
DB search
MGAPPPSPGLPPSWAAMMAALYPSTDLSGVSSSSLPSSPSSSSPNEVMALKDVREVKEEN
TLNEKLFLLACDKGDYYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLL
DYGCQSADALLVAIDSEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVI
LAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPA
LIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEV
ILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRR
KPTCKKIVTVLTVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLY
SLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNS
LYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILG
PLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTF
HSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAM
LHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICS
HTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNEL
RQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgggggccccgcctccgtccccgggcctgcccccgtcgtgggccgcgatgatggcggcc
ctgtacccgagcacggacctgtcgggcgtctcctcctcctccctgccttcctccccatcc
tcgtcgtcgcccaacgaagtgatggcgctgaaggatgtgcgggaggtgaaggaggagaac
accctgaacgagaagcttttcttgctggcgtgcgacaagggtgactattatatggttaaa
aagattttggaggaaaacagttcaggtgacttgaacattaattgcgtagatgtgcttggg
agaaatgctgttaccataactattgaaaacgaaaacttggatatactgcagcttcttttg
gactacggttgtcagtccgcagatgcacttttggtggcaatcgactctgaagtagtggga
gctgttgacatactacttaatcatcgaccaaaacgatcatcaagaccaactatagtaaaa
ctaatggaacgaattcagaatcctgaatattcaacaactatggatgttgcacctgtcatt
ttagctgcccaccgtaacaactatgaaattcttacaatgctcttaaaacaggatgtgtct
ctgcccaagccccatgcagttggctgtgaatgcacattgtgttctgcaaaaaacaaaaag
gacagcctccggcattccaggtttcgtcttgatatatatagatgtctggccagtccagct
ctaataatgttgacagaggaggatccaattctgagagcattcgaacttagtgcagactta
aaagaactaagccttgtggaggtggaattcaggaatgattatgaagaactagcccgtcaa
tgcaaaatgtttgctaaagatttgcttgcacaagcccggaattcacgtgaattggaagtt
atcctaaaccatacgtctagtgatgaacctcttgacaaacggggactactagaagaaaga
atgaatttaagtcgtctaaaacttgctatcaaatataaccaaaaggagtttgtctcccag
tcaaactgccagcagttcctgaacaccgtttggtttggacagatgtcaggttaccgacgt
aagcccacctgtaagaagatagtgactgtgttaacagttggcatcttctggccggttttg
tcactgtgttatttgatagctcccaaatctcaatttggcaggatcattcatacacccttt
atgaaatttattattcatggagcatcatatttcacattcttgctgttactaaatctatac
tctcttgtctacaatgaggataagaaaaatacaatgggaccagcccttgaaagaatagac
taccttctcatactgtggattattgggatgatttggtcagacattaaaagactttggtat
gaagggttggaagactttttagaagaatctcgtaatcaactcagttttgtcatgaattcc
ctctatttggcaacctttgctctcaaagttgttgctcacaataagtttcatgactttgcc
gatcgaaaggattgggatgcgttccatcctacacttgtggcagaagggctttttgcattc
gcaaatgttctcagttatcttcgtctcttttttatgtatacaaccagctctattttgggc
ccattacagatttcgatgggacagatgttacaagattttggaaaatttcttgggatgttc
cttcttgttttgttttctttcacaattggattgacacaactctatgataaaggctacact
ccaaaagagcagaaggactgtgtgggcatcttttgtgaacagcagagcaatgataccttc
cattcgttcattgggacttgctttgctttgttctggtatattttctccttagcgcacgtg
gcaatctttgtcacaagatttagctatggagaggagctgcagtcctttgttggagctgtc
attgttggtacttacaacgtggtagttgtgattgtgctgaccaagcttctggtagcgatg
cttcacaaaagctttcagttgatagcaaatcatgaggacaaagaatggaagtttgctcga
gcaaagctgtggctcagctactttgacgacaagtgtacactacccccacctttcaacatt
attccttcaccaaagactatttgctacatgatcagtagcctcagtaagtggatttgctct
cacacatcaaaaggcaaagtcaaacggcaaaacagtttaaaggaatggagaaatttgaaa
caaaaaagagatgaaaactatcagaaggtgatgtgctgcttagtgcatcgctacttgacg
tccatgaggcagaagatgcaaagcacagaccaggcaacggtggagaatctaaatgaactg
cgccaagatctgtcaaaattccgaaatgaaataagggatttgcttggctttcggacttct
aaatatgccatgttttatccaagaaattaa
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