Neisseria gonorrhoeae NCCP11945: NGK_0113
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Entry
NGK_0113 CDS
T00728
Name
(GenBank) putative DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ngk
Neisseria gonorrhoeae NCCP11945
Pathway
ngk03030
DNA replication
ngk03430
Mismatch repair
ngk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NGK_0113
03430 Mismatch repair
NGK_0113
03440 Homologous recombination
NGK_0113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngk03032
]
NGK_0113
03400 DNA repair and recombination proteins [BR:
ngk03400
]
NGK_0113
Enzymes [BR:
ngk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NGK_0113
DNA replication proteins [BR:
ngk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NGK_0113
DNA repair and recombination proteins [BR:
ngk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NGK_0113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF7398
Motif
Other DBs
NCBI-ProteinID:
ACF28811
UniProt:
B4RPZ9
LinkDB
All DBs
Position
complement(83712..87146)
Genome browser
AA seq
1144 aa
AA seq
DB search
MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDLMNEFGLVKFYKACRGA
GIKPVGAADVWIGNPNAPDKPFRAMLVIRNDAGYLRLSELLTEAYVGQDRNIHHAELNPE
WLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKYAAWFPDTFYLELQRLPERPE
WEACVSGSVKLAEELGLPVVATHPTQFMNRDDFNAHEARVCIAGGWVLTDKKRPRDFTPS
QFFIPPETMLERFADLPEALENTVEIAKRCNLHITLGKNFLPLFPTPDGLSLDDCLIKLS
NEGLQERMVQLYPDEAERAAKMPEYQERLDFELNIIIQMKFPGYFLIVQDFINWAKTHGC
PVGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPERVSMPDFDVDFCQANRGRVIE
YVREKYGAQAVSQIVTFGTMSSKAVIRDVGRVLELPFMLCDKLSKLIPLEANKPLSLDDA
MKAQPQIQELLEAEEADELITLAKKLEDLTRGLGMHAGGVLIAPGKISDYSPVYQADESA
SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQNNIKNTAGDIVDVGKIPLDDQTAYQI
FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQ
YIHPLLEGILAPTYGIMVYQEQVMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIF
AEGAAKQGISREKSDEIFNYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATM
SSELDNTDQLKHFYDDCRANGIEFLPPDINESDYRFTPYPNMKIRYALGAIKGTGEAAVE
SIIAARQSGGKFTGLLDFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMD
NADQKAANANQGGLFDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQ
EVRQIAPTKLGRLKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDSSGQAEIMVGGQTLE
NCADCLKADQVLIIESKVSRDDYGGGDGLRIMANQVMTLQTARERYARSLSLALAPHHDI
GGLVRLLAAHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSV
RVNW
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagccgacctacatccccctgcgcctgcataccgaattctccattaccgacggt
atggtgcggattaaaaaactgattgccaaagcgcaagaatacggtttgcctgctttgggc
atcagcgatttgatgaacgaattcggtttggtgaaattctataaagcctgccgcggcgca
gggattaagcccgtcggcgcggcggacgtgtggataggcaatccgaatgcgcccgacaag
ccgttccgcgccatgctggttatccgcaacgatgcgggttatctgcgcttgagcgagctt
ttgacggaggcttatgtcggccaagaccgcaatatccatcatgcggaactcaatcccgaa
tggctggaaaacggcgacaacagcggcttgatttgtttgagcggcgcgcattacggcgaa
gtgggcgtgaatctgttgaacggcaatgaagacgcggcgcgtgcggcggcgttgaaatat
gcggcatggtttcccgatacgttttatttagagctgcaacgcctgcccgaacgccccgaa
tgggaggcttgcgtttccggcagcgtgaagctggcggaggaactgggtttgccggtggta
gcaacgcatccgacacagtttatgaaccgcgacgatttcaacgcgcacgaggcgcgggtg
tgcatcgcgggcggctgggtgctgacggacaagaaacgtccgcgcgatttcacgccgagc
cagtttttcattccgccggaaacgatgctggagcgtttcgccgacttgcccgaagccttg
gaaaacacggtggaaatcgccaaacgctgcaacttgcacatcacattgggcaaaaacttc
ctaccccttttccccacgcccgacggtttatcactcgatgactgtctcatcaaactctcc
aacgagggtttgcaggaacgcatggttcagctttatcccgacgaggcggaacgggcggca
aaaatgccggaatatcaggagcggctggactttgagctgaacatcatcatccaaatgaaa
ttccccggctatttccttatcgtacaagactttatcaactgggcgaaaacgcacggctgt
ccggtcgggccgggacgcggttcgggcgcgggttcgctggtggcgtattcgctgaagatt
accgacctcgacccgctgaaatacgcgctgctgttcgagcgtttcctaaaccccgaacgc
gtttccatgcccgactttgacgtggacttctgtcaggcaaaccgcggccgcgtgattgaa
tacgtgcgcgaaaaatacggcgctcaggcggtcagccagattgtgactttcggcacgatg
tcgtccaaagcggtcatccgcgacgtggggcgtgtgctggaactgccgtttatgctgtgc
gacaaactgtccaagctgattccgttggaagccaacaaacccctgagtttggacgacgcg
atgaaggcgcagccgcagattcaggaattgcttgaagcggaagaagcggacgaactgatt
acgctggcgaaaaaactggaagacctgacgcgcggtttgggtatgcacgcaggcggcgtg
ttgattgcgccgggcaagatttccgattacagccccgtgtatcaggcggacgaatccgcc
tcgcccgtatccatgtacgacaagggcgacgtggaagacgtgggtttggtgaagttcgac
tttttgggcctgcgcaacctgaccattatcgaaatggcgcagaacaacatcaaaaacacc
gccggcgatatcgtcgatgtcggcaagattccgcttgacgaccagactgcctaccaaatc
ttccgcgatgcgaacaccaccgccgtcttccagttcgagtcgaccggcatgaaaaaaatg
ctgaaaacggcgcatacgaccaagtttgaagaactcatcgccttcgtatcgctctaccga
cccggcccgatggacaacattcccgacttcgtcgcacgcatgaagggacaggaattccaa
tacatccacccgctgctggaaggcatcctcgcgccgacctacggcattatggtgtatcag
gaacaagtgatgcaggcggcgcagattatcggcggctactcgctcggcggcgcggacctg
ctgcgccgcgccatgggtaagaaaaagcccgaagagatggtgaaacaccgcgaaatcttc
gccgaaggtgcggcaaaacaaggcatttcgcgcgaaaaatccgacgaaatcttcaactac
atggaaaaattcgccggctacggtttcaacaaatcccacgccgccgcctacgccctgatt
tcctaccagaccgcatggctcaaagcccactatcccgccgaatttatggcggcgacgatg
tcgtccgaattggacaacaccgaccagctcaaacatttctacgacgactgccgcgccaac
ggcatcgagttcctgccgcccgacattaacgaatccgactaccgcttcacgccgtatccg
aacatgaaaatccgctacgcactcggcgcgattaaaggcacgggcgaagccgccgtcgaa
tccatcatcgccgcgcggcaaagcggcggcaaatttaccggcctgttggacttctgcgag
cgcgtcggcaaagaacacatgaaccgccgcaccctcgaagccctgatacgcggcggcgcg
ttcgacagcatcgaacccaaccgcgccatgctcttggcgaacatcgaccttgccatggac
aacgccgaccaaaaagccgccaacgccaatcagggcgggctgtttgacatgatggaagac
gccatcgaaccggtgcggctcatcgacgcacccatgtggagcgaatcggaaaaactcgcc
gaagaaaaaaccgtcatcggcttttacctgtccggccacccgttcggcccgtatgcccaa
gaagtccgccaaatcgccccgaccaaattaggccgtctgaaaccgcaagacagcgtgcgc
ctcgccggattcgttaccgccgtgcgcaccatgatgggcaaacgcggcaaaatcgccttc
gtcagcctcgaagattcgagcgggcaggctgaaatcatggtcggcggacaaacgctggaa
aactgcgccgactgcctcaaagccgaccaagtgctgattatcgaatccaaagtcagccgc
gacgattacggcggcggcgacgggctgcgcatcatggcaaaccaagtcatgaccctgcaa
acggcgcgcgaacgctacgcccgcagcctcagcctcgcccttgccccgcatcacgacatc
ggcggactggtacggctgctcgccgcccaccaactgcccgacacgccgcgcatcccgctt
caattgtcgtatgccaacgaaaaagcgtcgggcaggcttcaagtgcctccgaaatggacg
gttacaccgagttccgcattgttcggcgaactggaaacattgctcggcagccggtcggtg
cgcgtgaattggtaa
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