Neisseria gonorrhoeae NCCP11945: NGK_0580
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Entry
NGK_0580 CDS
T00728
Name
(GenBank) RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ngk
Neisseria gonorrhoeae NCCP11945
Pathway
ngk03410
Base excision repair
ngk03430
Mismatch repair
ngk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NGK_0580
03430 Mismatch repair
NGK_0580
03440 Homologous recombination
NGK_0580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngk03400
]
NGK_0580
DNA repair and recombination proteins [BR:
ngk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NGK_0580
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NGK_0580
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NGK_0580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ACF29271
UniProt:
B4RKC0
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All DBs
Position
481877..483577
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AA seq
566 aa
AA seq
DB search
MSVKIQTRPVNTDVFNHLLAAGADPLIARLCASRGVQSPAELDDKLASLLPYQSLTNCEA
AAGRLADAVERKEKILIVADYDADGATACAVGLDGLAAMGAKVDFLVPNRFEHGYGLTPE
LAEIAAAQGVDLLITVDNGIASIAGVARAQALGLDVIVTDHHLPADTVPDCIIVNPNQKG
CGFPSKSLAGVGVIFYVLTALRAELRRRNYFSDGIKEPNLGGLLDLVALGTVADVVPLDH
NNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKAQPFDMGFALGPRINAAGRLDDMSV
GIACLLARDDSEAQELAARLNNLNIERREIEQSMLRDALNAFPETLPSGQTTLVAYRDDF
HQGVVGIVASRLKDRFYRPTIVFAPADNGEVRGSGRSIPNLHLRDALDLVSKRHPDLILK
FGGHAMAAGLSILEHNIPAFQTAFEEAVREMVCEDDLSQTYITDGSLPACDITLEQAQNL
ACHVWGQGFAPPSFTDEFHVVRQQPLGAEGKHKKAWLQKDGCEFEAMFWRCSEDIPEYIR
TVYRPVANEWRDNLELQLYIDYWEAA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcaaaatccaaacccgccccgtcaataccgacgttttcaatcatttgctcgcc
gccggcgccgatcctttaatcgcccggctttgtgcctcgcgcggtgtgcaaagtcctgcc
gagttggacgacaaactcgcttccctcctgccttatcaatcgctgacgaattgcgaagcc
gccgccggccgtttggcggatgcggttgaacgcaaggaaaaaatcctgattgtcgccgac
tatgatgccgacggcgcgaccgcgtgtgccgtcggtttggacggtttggcggcgatgggc
gcgaaagtggatttcctcgtgcccaaccgctttgagcacggctacggcttaacgcccgaa
ctcgccgaaatcgccgccgcgcaaggcgtggatttgctgattacggtggataacggcatt
gccagtattgcaggcgtggcgcgcgcgcaggctctgggtttggatgtcatcgttaccgac
caccatttgccagccgataccgtacccgactgcatcatcgtcaatccgaaccaaaaaggc
tgcggttttccaagcaaaagcttggcgggcgtgggcgtgattttttatgtgttgacggcg
ttgcgtgccgaactgcgccgccgcaattatttttcagacggcatcaaagagccgaatctg
ggcggccttttggatttggtcgcactcggtaccgtcgccgatgtcgtccccctcgaccac
aacaaccgcatcctcgtgtcgcaaggtttgaaacggatgcgttcgggcaaaatgcgcccc
ggcatccgcgccttgtttgaagtggcgcggcgcgattggcgcaaggctcagccgtttgat
atgggctttgcgttgggcccgcgcatcaacgccgccggacggctggacgatatgtcggtc
ggcatcgcctgcctgttggcgcgagatgattccgaagcgcaggaactggcggctcggtta
aacaacctcaatatcgaacgccgcgaaatcgagcagtctatgctgcgagacgcgttgaac
gcctttcccgaaaccctgccttcaggtcagacgactttggtggcgtatcgcgacgacttc
catcaaggcgtggtcggcattgttgccagccgcctcaaagaccgtttttaccgtccgacc
atcgtgtttgcgccggcggacaacggcgaagtgcgcggttcgggacgctccattcccaat
ctgcacttgcgcgatgctttggacttggtgtccaaacgccatcccgatttgattttgaaa
ttcggcggacacgcgatggcggcgggtttaagcatacttgaacacaatattcccgcgttt
cagacggcctttgaagaagccgtgcgtgagatggtgtgcgaagacgatttgtcgcaaacc
tatattactgacggcagcctgcccgcctgcgacatcacgttggaacaggcgcaaaacctc
gcctgccacgtttgggggcagggctttgcgccgccgagctttaccgacgagttccacgtc
gttcgccagcagcctttgggcgcggaaggcaaacacaaaaaagcgtggttgcaaaaagac
ggctgcgaatttgaagcgatgttctggcgttgcagcgaagacattcccgaatacatccgc
acggtgtaccgccccgttgccaacgaatggcgcgacaacctcgaattgcagctttatatc
gactactgggaagcggcgtag
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