Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141: RG1141_CH12010
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Entry
RG1141_CH12010 CDS
T03208
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ngl
Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
Pathway
ngl03030
DNA replication
ngl03430
Mismatch repair
ngl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RG1141_CH12010
03430 Mismatch repair
RG1141_CH12010
03440 Homologous recombination
RG1141_CH12010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngl03032
]
RG1141_CH12010
03400 DNA repair and recombination proteins [BR:
ngl03400
]
RG1141_CH12010
Enzymes [BR:
ngl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RG1141_CH12010
DNA replication proteins [BR:
ngl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RG1141_CH12010
DNA repair and recombination proteins [BR:
ngl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RG1141_CH12010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
CDN53556
UniProt:
A0A068T678
LinkDB
All DBs
Position
1150955..1154452
Genome browser
AA seq
1165 aa
AA seq
DB search
MADTTDVKSGSVELGTSPQFVHLRVHSAYSLLEGALPLKKILSKAIADNQPAIAITDTNN
LFVALEFAQKAIGDGLQPIIGCQLSIDMEDQSDERRNSHQQLAKLPAIVVLAANAVGYER
LVDLISRAYLGDEGHQSIHISRSWLEDGSTEGLIALTGAGSGPVDVALKEGNATLAEARL
LKLKEIFGDRLYVELQRHGAYDRRHEHKIVTLAYDHDLPLVATNEAFFPTKADYDAHDAL
MAVAHNAIVSDDTRFRLTPDHYLKSRAEMAKLFADLPEALENTVEIAQRCSFVLKTRNPI
LPRFTGATDDPAEAERAEAEELRRQSVEGLEERIATLGMTRGYTEQDYRERLDFELSVIE
KMKFPGYFLIVADFIKWAKQQGIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLN
PDRVSMPDFDIDFCQDRREEVIRYVQQKYGREQVAQIITFGSLQARAALRDVGRVLEMPY
GQVDKICKLVPNNPANPTPLSKAIEEDPKFQEEADKEPVVARLLDIAQKIEGLYRHASTH
AAGIVIGDRPLSKLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKTAVDF
CRKRGIEVDLAKIPLDDAKTYEMLSRGETVGVFQVESAGMRKALIGMRPDCIEDIIALVA
LYRPGPMENIPTYNARKHGEEEIESIHPTIDHLLKETQGVIVYQEQVMQIAQVLSGYSLG
EADLLRRAMGKKIKAEMDQQSERFVDGAIKNGVSKPQANNIFELLAKFANYGFNKSHAAA
YAIVSYQTAFMKAHYPVEFLAASMTYDMSNSEKLNDFRQDAGRLGISVIPPSVQTSFRHF
ETGDNRIYYALAAIKGVGESAVDHITEVRGDVPFASIEDFCLRIDPKQVNRRVMESLISA
GAFDCFGRDRAELSGGLDRIIGYAQRAQGEKVSGQHDMFGSSSASGPETLIFPAFTPWMP
SEKLMREYQVLGFYLSAHPLDAYANVLAKMRVQNFADFSAAVKQGATAGRLAGTVTSKQE
RKTRTGNKMGIVTFSDATGQFEAVLFSEGLAQYRDLLEPGKSLVITVQAEERPEGIGLRI
QTAQSLEEKSVQMQKALRVFVRDSGPMRAVARHLNARGDGLVSFVIIKDDGKREIEVELT
EKYRISPEIAAALRTAPGVLDVELV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacaacggacgtaaaatcgggatcggtagagctgggaaccagccctcaattc
gttcacctgcgcgtccattccgcctattcgcttctcgaaggcgccttgccgctcaagaag
atcctctcgaaggcgatcgcggacaatcagcctgcgatcgcgatcaccgacaccaacaat
ctgttcgtcgcgctggaattcgcccagaaggcgatcggcgacggcctgcagccgatcatc
ggctgccagctgtcgatcgatatggaagaccagtccgacgagcgtcgcaacagccaccag
cagctcgccaagctgccggcgatcgtcgtgctggcggccaatgccgtcggttacgaacgg
cttgtggacctgatcagccgcgcctatctcggtgacgaggggcatcagtccatccatatc
agccgctcctggctggaggacggcagcaccgaaggcctgatcgcgctgaccggggcagga
agcggtccggtcgacgtggctctgaaggaaggcaatgctacgcttgccgaagcgaggttg
ctgaagctcaaggagatcttcggcgatcggctctatgtcgaactgcagcgccacggcgct
tacgatcggcgccacgagcacaagatcgtcacgctcgcctacgaccacgacctgccgttg
gttgcgaccaacgaggccttctttcctaccaaggccgattacgatgcccatgacgcgctg
atggcggtcgcccacaacgcgatcgtctcggacgatacgcgattccgcctgacgccggac
cattatctgaagagccgtgcggagatggcaaagctgtttgccgacctgccggaggcgctc
gaaaacaccgtcgagatcgcgcagcgctgctccttcgtgctgaagacccgcaatccgatc
ctgccgcgcttcaccggcgccaccgacgatccggcggaagccgagcgcgccgaggcggag
gagctgcgccgccagtccgtcgaaggcctcgaagagcgcatcgcaacgctcggcatgacg
cgcggttataccgaacaggattatcgggagcggctggatttcgagcttagcgtcatcgag
aagatgaagtttccgggctacttcctgatcgttgccgacttcatcaaatgggcgaagcag
cagggcatcccggtcggcccgggccgtggttcgggtgcgggctcgctggtcgcctatgcg
ctcaccattaccgacgtcgatccgctgcgcttctcgctgctgttcgagcgcttcctcaat
cccgaccgcgtctcgatgccggacttcgacatcgacttctgccaggatcgccgcgaagag
gtgatccgctacgtgcagcagaaatacggtcgcgagcaggtggcgcagatcatcaccttc
ggttcgctgcaggcgcgcgccgcgttgcgcgacgtgggccgtgtgctcgaaatgccctat
ggccaggtcgacaagatctgcaagctggtgccaaacaacccggccaacccgaccccgctg
tcgaaggcgatcgaggaggatccgaaattccaggaggaggccgacaaggaaccggtcgtc
gcgcgtctcctcgatatcgcccagaaaatcgaaggcctctaccgccacgcctcgacccac
gccgccgggatcgtcatcggcgaccgtccgctgtcgaaactagtgccgatgtatcgggac
ccgcgctcggacatgccggtcacccagttcaacatgaaatgggtggagcaggcgggtctg
gtgaagttcgacttcctcggcctgaagacgctgacggtcctgaagaccgcggtcgatttc
tgccgcaagcgcggcattgaggtcgatctcgccaagatcccgctcgacgacgccaagacc
tacgagatgctctcgcgcggcgagacggtcggcgtgttccaggtggaaagtgcgggcatg
cgcaaggcgctgatcggcatgcggccggactgtatcgaggacattatcgcgctcgtggcg
ctttatcgtccgggcccgatggagaacattccgacctataatgcccgcaagcacggcgag
gaggagatcgagtcgatccacccgacgatcgaccatctgctgaaggagacgcaaggggtt
atcgtctatcaggaacaggtgatgcagatcgcccaggtgctgtcgggctattcgctcggc
gaggccgacctgctgcgccgcgccatgggcaagaagatcaaggcggagatggaccagcag
agcgaacgctttgttgatggcgccatcaagaacggcgtctccaagccgcaggccaacaac
atcttcgaactgctggcaaaattcgccaactacggcttcaacaagtcacacgccgcggcc
tacgccatcgtctcctaccagacggccttcatgaaggcgcattatccggtggagttcctc
gccgcctcgatgacctacgacatgtcgaacagcgagaaactgaatgatttccggcaggat
gccggccgcctcggcatctcagtcattccgccgtcggtgcagacctcgttcaggcatttc
gagaccggcgacaacaggatctattacgcgctggccgccatcaagggcgtcggcgagtcg
gcggtcgaccacatcaccgaagtgcgcggcgatgtgccgtttgccagcatcgaggacttc
tgcctgcggatcgacccgaaacaggtcaaccgccgcgtcatggaaagcctgatctcggcg
ggtgccttcgattgtttcggccgcgatcgagccgagttgagcggcggcctcgaccgcatc
atcggttatgcccagcgcgcgcaaggggagaaggtgagcggccagcacgacatgttcggc
tcgtcctccgcctccgggccggaaacgctgattttcccggcgttcacgccgtggatgccg
tccgaaaagctgatgcgcgaatatcaggtgctcggcttctatctctcggcccatccgctc
gatgcctatgccaacgtgctcgccaagatgcgcgtccagaatttcgcggacttttccgcc
gccgtgaaacagggcgccaccgccggccggcttgccggaacggtgaccagcaagcaggag
cgcaagacccgtaccggcaacaagatgggcatcgtcaccttctcggacgcgaccggccag
ttcgaggcggtgctgttctcggaggggctggcgcaatatcgagacctgctcgaacccggc
aagtcgctggtcatcaccgtgcaggcggaagagcggccggaaggcatcggcctgcgcatc
cagacggcgcagtcgctcgaggaaaagtcggtgcagatgcagaaggcgctgcgcgtcttc
gtccgcgactcaggcccgatgcgcgcggttgcccggcacctcaatgcccggggcgacggg
ctggtgtccttcgtcatcatcaaggatgacggcaagcgggaaatcgaggtggagctgacg
gaaaaataccgcatctcgccggaaatcgccgcggcgctgaggacggcgccgggcgttctc
gatgtcgagctggtctag
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integrated database retrieval system
