Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141: RG1141_CH12430
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Entry
RG1141_CH12430 CDS
T03208
Name
(GenBank) Hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ngl
Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
Pathway
ngl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RG1141_CH12430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngl03019
]
RG1141_CH12430
03009 Ribosome biogenesis [BR:
ngl03009
]
RG1141_CH12430
Enzymes [BR:
ngl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
RG1141_CH12430
Messenger RNA biogenesis [BR:
ngl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RG1141_CH12430
Ribosome biogenesis [BR:
ngl03009
]
Prokaryotic type
rRNA processing factors
RG1141_CH12430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CDN53598
UniProt:
A0A068T532
LinkDB
All DBs
Position
complement(1190854..1193835)
Genome browser
AA seq
993 aa
AA seq
DB search
MADKMLIDASHEEETRVVVVRGNRIEEFDFESQHKKQIRGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFAEIHPDYYQIPLADRQALMQQEAEDQRKIAEAEAADPVVDPAHQEQPDI
GISIPAPAAEPESEAGGQATEASPAEVVAAEEAEKPKAKPRRSRARKKPADEAPAAEAAA
SEGESAPSSDNNDDDGSTPGEMAAMVETDSISEDVDARRGGGRNDDFDDDDDDDHGEKEV
IESVGAEDAMEEVPDRVVRKPRKQYRIQEVIKRRQILLVQVAKEERGNKGAALTTYLSLA
GRYSVLMPNTARGGGISRKITQPQDRKRLKEIARELDVPQGMGVILRTAGANRTRVEVKR
DFEYLMRLWENVRTLTLSSTAPTLVYEEGSLIKRSIRDLYNKDISEIIVSGEEGYREAKD
FMKMLMPSHAKVVQPYRDLHPIFARSGIEAQLDRMLQPQVTLKSGGYLIMNQTEALVAID
VNSGRSTREHSIEETALQTNLEAAEEVARQLRLRDLAGLIVIDFIDMEEKRNNRAVEKRL
KDCLKNDRARIQVGRISHFGLLEMSRQRIRASVLESTTQICTHCGGTGHVRSQSSVALHV
LRGVEEYLLKNTTHDITVRTTPEIALYLLNHKRASIVDYENRFGVSIFIESDVSIGSSHF
AIDRGEPVENPVKIESLMQFAAIPVEEDDDDIIVEADEEEEEEIVASSQPAAAAVAERAQ
SQGDDPNGRKRKRRRRRRNRGGEKGADAQAAQGGSDDMADGDEDGDEGEDDVSEAGEASD
ATVAADSDSEENRRKRRRRGKRGGRRNRNGEDGQELNASDDSEAADEDASSEDVEAVPAA
AAAETAEAIAVEAVAAPVEAEAAPAGKAEAKPRRSRRGKAATVADAPAAEEVPVAAADTA
PVETVVEQVEAALGEEPRAAEVAPAAEAPVEEAPTAEQVDAGDAKPARANRASNISSSAE
AVVKSSDPAATPETDADPSKPKKAGWWQRRGFF
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaatgcttatcgacgcgtctcacgaagaggagacgcgcgtagttgtcgtt
cgcggtaaccggatcgaggaattcgatttcgaatcgcagcataagaaacagatacgcggc
aatatctatctggcgaaggtgacgagggtcgaaccctcactacaggccgctttcgtcgac
tacggcgggaaccgtcacggcttcctcgccttcgccgaaatccatcccgactattatcag
atcccgcttgccgaccgccaggcgctgatgcagcaggaagccgaggatcagcgcaagatc
gccgaggcggaagccgctgatccggtggtcgatccagcccaccaggaacagccggatatc
ggcatctccatcccggcacccgccgccgagcccgaaagcgaagccggtggccaagcaacg
gaagcaagcccggccgaggtcgtcgctgctgaagaggccgaaaagccgaaggccaaaccg
cgccgcagccgcgcccgcaagaagccggcagacgaagcgcccgccgcagaagccgcagca
tccgagggcgaaagcgcgccctcctccgacaacaatgacgacgacggttcgacgcccggc
gaaatggccgcgatggtcgagaccgattcgatttcggaagacgtcgacgcccgccggggc
ggcggccgcaacgacgatttcgatgacgacgacgatgacgaccacggcgagaaggaagtg
atcgaatcggtcggcgccgaagacgcgatggaagaagttccggaccgcgtcgtgcgcaag
ccgcgcaagcagtatcgcatccaggaagtcatcaagcgccgccagatcctgctcgtgcag
gtcgccaaggaagagcgcggcaacaagggcgctgctcttaccacctacctttcgctcgcc
ggccgttattcggtcctgatgccgaacacggcgcgcggcggcggtatctcccgcaagatc
acccagccgcaggaccgcaagcgtcttaaggaaatcgcccgcgaactcgacgtgccgcag
ggcatgggcgtgatcctgcgcaccgccggcgccaaccgcacccgcgtcgaagtcaagcgc
gacttcgaatacctgatgcgcctgtgggagaacgtccgcacgctgacactgagctcgacc
gcccctaccctcgtctatgaagaaggctcgttgatcaagcgctcgatccgcgacctctac
aacaaggacatttccgagatcatcgtgtccggcgaagaaggctatcgtgaagcgaaagac
ttcatgaagatgctgatgccgagccatgccaaggtggtccagccctatcgcgacctgcat
ccgatctttgcccgttccggcatcgaggcgcagctcgaccgcatgctgcagccgcaggtg
acgctgaagtccggcggctacctgatcatgaaccagacggaagcgctcgtcgccatcgac
gtcaactccggccgttcgacccgcgaacattcgatcgaggaaacggcgctccagaccaat
ctggaagcggcggaagaagtcgcccgccagcttcgcctgcgcgaccttgccggcctgatc
gtcatcgacttcatcgacatggaagaaaagcgcaacaaccgcgccgtcgagaagcggctg
aaggattgcctgaagaacgaccgcgcccgcatccaggtcggccgtatctcgcatttcggc
ctgctcgaaatgtcgcgccagcgtattcgtgcttcggttctcgaatcgacgactcagatc
tgcacccattgcggcggtaccggtcatgtgcgctcgcagtcgtcggtcgccctgcatgtg
ctgcgcggcgtcgaggaatacctgctcaagaacaccacgcatgacatcaccgtgcgcacc
acgccggaaatcgcgctctatctcctcaaccacaagcgcgccagcatcgtcgattacgag
aaccgcttcggcgtctcgatcttcatcgaatcggatgtcagcatcggctccagccacttc
gcgatcgatcgcggcgagccggtcgaaaatccggtcaagatcgaaagcctgatgcagttc
gcggccattcccgtcgaagaagacgatgacgacatcatcgtcgaggccgacgaggaggaa
gaggaagagatcgttgcttcgtcgcagccggcagctgctgcggttgcggagcgcgcccag
tcgcagggcgacgatccgaacggccgcaagcgcaagcgccgccggcgtcggcgcaaccgt
ggcggcgaaaagggcgcagatgcccaggccgcgcagggcggcagcgacgacatggctgat
ggcgacgaggacggcgacgaaggcgaggacgatgtttccgaagccggcgaagcatccgac
gcaacggttgccgccgattcggactcggaagaaaatcgccgcaagcgccgccgccgcggc
aagcgcggtggtcgccgcaatcgcaacggcgaggacggacaggaactgaacgcttcggat
gacagcgaagcggccgacgaagatgcgtccagcgaagacgtcgaggcagtgccggcagca
gccgcagccgagaccgctgaagcgatcgccgtcgaggcagtcgctgctcccgtcgaggcg
gaagccgcacctgccggcaaggcagaagccaagccccgccgttcgcgtcgtggcaaggcg
gcgaccgtcgccgacgccccggctgcggaagaggtcccagtggctgccgcagatacggct
ccggtggaaaccgtcgtcgagcaggtcgaagctgcactcggcgaagagccacgggctgct
gaggttgctccggctgccgaagctccagtcgaagaagcgccgaccgctgaacaggttgac
gccggcgacgcgaaaccggctcgtgccaatcgcgcctcgaacatctcctcctccgccgag
gcggtggtgaagagttccgatccggcggcaacgcccgagaccgacgccgatccgtcgaag
cccaagaaggccggctggtggcagcgccgcggcttcttctga
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