Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141: RG1141_CH23720
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Entry
RG1141_CH23720 CDS
T03208
Name
(GenBank) Viral (Superfamily 1) RNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ngl
Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
Pathway
ngl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RG1141_CH23720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngl03400
]
RG1141_CH23720
Enzymes [BR:
ngl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RG1141_CH23720
DNA repair and recombination proteins [BR:
ngl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RG1141_CH23720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
AAA_16
AAA_22
PIF1
SLFN-g3_helicase
Sigma54_activat
AAA
AAA_23
NACHT
ABC_tran
NTPase_1
TsaE
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
CDN54710
UniProt:
A0A068TBG7
LinkDB
All DBs
Position
2352375..2355995
Genome browser
AA seq
1206 aa
AA seq
DB search
MTTHLTARIAWHDDGWNGRICSKPEQNTYCVGMKSFPGDLIHRERNLKREQACSGQALCN
VKSVDLPPCIYSINAFGPDAIRGYSNPPDFFYGGAEREEWDMPPSTVCVWPYEAMYGDEV
YTDGRLDNDKRRAGADEFFAELEEDESLIFYYANHSNPFTDENDPRYVIVGVSRVKQIGK
PLFYSNPSDYVRQNYANGMIWARNIASHYPDEGFRIPYHAYRERPEILDRLLVTPENPAT
CKYGARHLTDDVTIGMLEQMLDVIARLKEIGDTNEDWDARATWVQAQIAKLWKRRGLYPG
LLTVMDFLDAGGSIKNGKWYCDRGEEKKAFELFFDALEAGKNCPELELTGLTLKRVSRSW
QLLEYDVQAFLKTIAVRIDLYLDQLESVVGQKRIAHGLPESLEAIVEDPYLLSEFFVGDG
PDDIIPWSTIDRGVFPSPELGGEVLCDMLNDDPRRLRSLCVEQLKREPNQTFRPADIILK
EINARMDRLPEWKRHNFSLRYFEVDREPLEKALVLKKEDDRLYLYLKHVFLDERTVDRTL
TELFDRPAITLPRPVPEGFWLRAVSDDESTLAKKGGDEYRLAVEAQASQCAQIFRLPLSV
VSGRAGTGKTTIIRAIVKAIRQAEGTGAPINVMTPTGKATDRVRAVFERYNIGGVNVSTM
HSFLASNGWLNDNLTFKRWGGKCADLEGTIVIDETSMLDLALAATFFRSIEWQNVKRLIL
VGDHNQLPPIGRGRVFSDIIEWLRKVGAPNLAVLQTNMRQMENRLDAKGQGILALAELFL
VDSAVYGEQTSPAAEQLLQKVHQGGKIDEDLDVVYWNSADELIASLVADLVSVLPRDAEE
EQIYKLWRNEVMQNKPERLQVLTPHRGELHGVDALNIELQSILTNDLIDRVGAVDGITLN
DKVIQIQNRTSRRGIWAYDFALGKSRQVELFNGEIGYVEPHNFDRADLKKVFSGYSKKRL
KRFQVKFARKDKICVNYGREIPTSTRGKSTSESVENNLELAYAISIHKSQGSEFSHTFVI
LPASRRSLSAELLYTALTRAQGHCQLYIQGNLSPLLEARRKENAQSLLVSSSLFGHFRTV
DDRLLARSDWYQSGKVHEALSGDMVRSKSEVIIANLLHQAGVPFTYEEPLYAEDGTFFLP
DFTLRIGGEKYYWEHWGMLSDKGYAAHRDLKKQWYTTHFPGRLIETLESGQLSSEAKSQI
DEIRLK
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcatctcaccgcgcgcattgcctggcacgatgacggatggaatggccgcatc
tgttcgaaaccggagcagaacacctactgtgtcggcatgaagtcctttcccggtgatttg
atccaccgcgagcgcaatctgaaacgggagcaagcctgttccggacaggcgctttgcaat
gtcaaaagcgttgatctcccgccgtgtatatacagcatcaacgctttcggccccgatgcc
attcgaggatactccaacccgcccgattttttctacggcggcgctgaacgggaagaatgg
gatatgcccccgtcaactgtctgcgtctggccgtacgaagccatgtatggcgatgaggtc
tataccgatggccgcctcgacaatgacaagcgccgggcgggggcggacgagttctttgct
gagttggaggaggacgagagccttatcttttactacgccaaccattccaacccgtttacc
gacgagaacgatccgaggtatgtgatcgtcggcgtctcgcgcgtgaagcagatcggaaag
ccgctgttttattccaatccctctgactatgttcgtcagaattatgcaaatgggatgata
tgggcgcgaaacattgcgtcccattatcctgacgaaggcttccgtataccctatcatgct
tatcgcgagcggccggaaattctcgacaggcttctggtcacgcccgaaaatcctgccacc
tgcaaatacggcgcacgtcatctcaccgacgatgtgaccatcggcatgctagagcaaatg
ctcgacgttatcgcgcggttgaaggagatcggcgacacgaatgaggattgggatgcccgc
gccacatgggtacaggcgcagattgccaaactctggaagcgtcgcggtctgtatcccgga
cttttgaccgtgatggatttcctagatgcagggggctcgattaaaaacggcaagtggtat
tgtgaccgtggtgaggagaagaaggcctttgagctattcttcgatgccctggaagcgggc
aagaactgccccgaactggagcttaccggccttaccctgaagcgggtgtcgcgttcctgg
cagttgcttgagtatgatgtgcaggcttttctcaagacgattgcggttcggattgatctc
taccttgatcagttggaaagcgtcgtcgggcagaaacgcatcgcacatggccttccggag
agtttggaagcgatcgtcgaggacccctatctgttaagcgagtttttcgttggtgacggg
cctgacgacattattccctggagcacgattgatcgtggggtctttccatcgccggagttg
ggcggcgaggtgctctgcgatatgttgaacgacgacccccgaagactgcgatccctttgt
gttgagcagttaaagcgcgagccgaaccagactttccgcccggcagacattatcctcaaa
gaaatcaacgcgcgtatggatcgtttgccggaatggaaacggcacaatttcagcctgcgc
tatttcgaagttgacagggagccgctcgaaaaggccctggtgctgaaaaaggaagacgat
cggctttacctctatctgaagcacgttttcctggacgaaaggactgtagacaggacgttg
accgaacttttcgatcgaccggcgatcacgcttccgcgcccggttccggaaggattttgg
cttcgagcggtatccgacgatgaatcgactttggccaagaagggcggcgacgaataccgg
ctggcagtggaagcgcaggcgagccagtgcgctcagattttcaggttgccgttatcggtc
gtttccggccgcgccggaaccggcaagaccaccatcatccgcgccatcgtgaaagccatt
cggcaggccgaagggaccggagcaccgatcaatgtaatgacgccgaccggcaaggcgacg
gatcgtgtgcgcgcagtgttcgagcgatataatattggcggggtcaacgtctcgacgatg
cattcattcctggcatcaaatggatggctcaacgacaaccttacattcaaacgatgggga
ggaaaatgcgctgatctcgaaggcacgattgttatcgacgagacgtccatgctcgatctg
gctctcgcagcgacttttttccggtctatcgaatggcagaatgtaaaacgactgatcctg
gtaggcgaccataatcagctcccacccatcggccgagggcgcgtcttttcggacatcatc
gaatggctgcgaaaggtcggagcacccaacctggcggtgctgcaaaccaatatgcgccag
atggagaatcggctcgatgcaaaaggtcagggcatactcgctctggccgaactattcctg
gtggattctgccgtttacggcgagcagacctcgcctgcggctgaacaactccttcagaaa
gtgcatcagggcggtaagatcgatgaagacttggacgttgtctattggaattcagccgat
gagctaattgcgagcttggttgctgatctagtctctgttcttccgagagatgccgaagaa
gaacaaatatacaagctttggcgaaatgaagtcatgcaaaacaagccagaaagacttcaa
gtcttgacgccacatcgcggggagctccacggcgtcgacgcattgaacatcgagctgcaa
tcaatccttacgaatgatctgattgatagagtgggggctgttgatgggattaccttgaac
gacaaggtgattcagatccagaacaggacatcccgtcggggaatttgggcttacgatttt
gctctaggaaaatctcgtcaagttgagttatttaacggcgagatcgggtatgttgagccg
cacaacttcgatcgagccgatctgaagaaggtcttttccggttacagcaaaaagcgactg
aagcgatttcaggtgaaatttgcgcggaaagacaagatctgcgttaattacggacgcgag
attcctacctcgacgaggggaaagtctacctcagagagcgtcgaaaataacctcgaactc
gcttacgcgatttcgatacacaaatcgcaaggaagcgagttctctcatacattcgtgata
ctaccggcttcacgcaggtcgctttcagcagagttgctctatacagcattaacgcgtgcg
caaggacattgtcagctttatatacagggcaatctctcgccattgcttgaagcgcgaagg
aaggaaaacgcacaaagcttgttggtttcgtcttcgctattcgggcactttaggacagtc
gacgaccgccttttggcaagaagtgattggtatcaaagcggaaaggtccatgaggcgttg
agcggcgacatggttcgttcgaaatccgaggtcatcatcgcaaatctactccaccaggct
ggagtgcctttcacctacgaggagccgctttacgccgaagacggaacgttcttcttgcct
gatttcacgcttcgaattggtggagaaaaatactactgggagcattggggcatgttgtcc
gacaagggctacgcggcgcatcgcgaccttaagaaacagtggtacacgacacattttcca
ggccgcttgatcgagacgttggaaagtgggcaattgagctcagaagcgaaaagtcagatc
gacgaaattcggcttaaataa
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