Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141: RG1141_CH26360
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Entry
RG1141_CH26360 CDS
T03208
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ngl
Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
Pathway
ngl00550
Peptidoglycan biosynthesis
ngl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ngl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RG1141_CH26360
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngl01002
]
RG1141_CH26360
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ngl01011
]
RG1141_CH26360
Enzymes [BR:
ngl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RG1141_CH26360
Peptidases and inhibitors [BR:
ngl01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RG1141_CH26360
Peptidoglycan biosynthesis and degradation proteins [BR:
ngl01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RG1141_CH26360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Beta-lactamase
Peptidase_S13
CytoC_RC
Motif
Other DBs
NCBI-ProteinID:
CDN54973
UniProt:
A0A068T963
LinkDB
All DBs
Position
complement(2594401..2595684)
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AA seq
427 aa
AA seq
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MYRIPQILAFLWVLGASLAISRSAEAGYSHFIYDAKSGKVLASENADEINHPASLTKMMT
LYMTFEALREGRLKWDQDIVVTPNAASKIPSKLGVPAGRTITVREAVLGMVVRSANDAAA
TMGDYLGGSEDRFGVMMTKKARALGMSRTVFRNASGLPDDEQVTTARDMAQLALALIRDF
PKEYQLFSLKNMEFRGKRLRGHNNLMYRYPGMDGVKTGFINASGYNIASAVNIDGRRVIG
VVMGGKTARQRDDQMAALLDRYVPGNTAAPGGLVAFQAQKRPAEDTAPLAFATPSPRKEI
ALGVAPKTALANLYAAPPNAVPQTTPVPTAPSRMASSQTMTPQQPVGSLWRIQIAAAASR
DQASALLEKAMPLLAQGYGRVAPSVESYADSGKEIFRARFVGFADGDAATRACSVLQAKA
ITCFVVR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgaattccgcagattttggcattcctgtgggtgcttggcgcctctctggccatc
agccgttcggcagaggccggctattcccacttcatctatgacgcgaagagcggcaaggtc
ctggcgtcggaaaatgccgacgagatcaaccacccggcatcgcttaccaagatgatgacg
ctctacatgaccttcgaggcgctgcgcgagggccgcctcaagtgggaccaggatatcgtc
gtgacgccgaatgcggcgtcgaaaattccctccaagctcggcgtgccggcgggtcgaacg
atcacagtacgcgaggccgtgcttggcatggtcgtgcgctcggccaatgatgccgccgcg
acgatgggtgattatctcggcggctcggaagaccgtttcggggtgatgatgaccaagaag
gcgcgggcgctcggcatgagccgcaccgtgttccgcaatgcctccggcctgccggacgac
gaacaggtgacgacggcgcgcgacatggcccagctggcgctggcgctgatccgcgacttt
cccaaggaatatcagctcttttctttgaagaacatggagttccgcggcaagcgcctgcgc
ggccacaacaacctgatgtatcgctatcccggcatggacggtgtcaagaccggctttatc
aacgcttccggctacaatatcgccagcgccgtcaacatcgacggccgccgggtgatcggc
gtcgtcatgggcggcaagaccgcccgccagcgcgacgaccagatggcggcgctgctcgac
cgctacgtgcctggcaacactgcggcacccggcggtctcgtggcattccaggcgcagaag
cggccggccgaagacaccgcgccgctcgccttcgcgacgccttcgccgcgcaaggagatc
gcgctgggcgttgcgcccaagacggcgctcgccaatctctatgccgcgcctccgaacgcc
gttccccagaccacgccagtcccgacggccccatcccggatggcgtcgtctcagacaatg
acgccccagcagccggtcgggtcgctctggcgcatccagatcgccgccgccgccagccgc
gaccaggcatccgcgctgctggaaaaggcaatgccgctgctcgcccaagggtatggccgc
gtcgcgccgagcgtcgaaagttatgccgatagcggcaaggaaatcttccgtgctcgcttc
gtcggttttgccgacggcgatgccgccacgcgcgcctgctcggtcctgcaggccaaggcg
atcacctgtttcgtggtacgataa
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