Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141: RG1141_CH32420
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Entry
RG1141_CH32420 CDS
T03208
Name
(GenBank) Topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ngl
Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
Brite
KEGG Orthology (KO) [BR:
ngl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngl03032
]
RG1141_CH32420
03400 DNA repair and recombination proteins [BR:
ngl03400
]
RG1141_CH32420
Enzymes [BR:
ngl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RG1141_CH32420
DNA replication proteins [BR:
ngl03032
]
Prokaryotic type
DNA Topoisomerases
RG1141_CH32420
DNA repair and recombination proteins [BR:
ngl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RG1141_CH32420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CDN55577
UniProt:
A0A068TAP1
LinkDB
All DBs
Position
complement(3210538..3211569)
Genome browser
AA seq
343 aa
AA seq
DB search
MLTTIDIDQDSLRTIGLTYVSDTEPGIRRLKRGKGFTYRLPDGTLLADPEHRLRIASLGL
PPAYENVWICLDPRGHLQATGYDSRGRKQYRYHHDWQSFRSERKFDQLVRFGEALPRIRR
KAKRDLELGLDTSDAVIAALVALMDATHLRVGNRLYAKENKTYGATTLLKRHMTLSGESI
MLRFVAKGGRRVQHTLKHPRLQRILEEIADLPGRQLFSWPDEQGVPHPIDSGRLNAYLAE
VAGFAVSAKTFRTWGGSLAALMAAWEVAEEGGRPKIKAMCKAAAEVLHNTPAVCRSSYIH
PSILALSEDVSPLEKVMRDKAALTRPKELRVNERRLLAFLKEV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccacgatcgacatcgatcaagactccctcaggacaatcggccttacttatgtc
agcgatacggagcccggcatccgacggctcaagcgcggcaagggcttcacctaccgcctg
ccggacggcaccttgcttgccgatccggaacatcgcctgcggatcgcgtcgctcggcctg
ccgcccgcctatgagaatgtctggatctgccttgatccgcgcggacatcttcaggcgacc
ggttacgattcacgcggccgcaagcagtatcgctaccatcacgactggcagagtttccgc
agcgaacgcaaattcgatcagctcgtccggttcggcgaggccttgccgcgcatccgccgc
aaggcgaaacgcgatctggagcttggcctcgacacgtccgatgcggtgatcgccgcgctg
gtggccctgatggacgcaacccatctgcgggtcggcaaccgtctctacgccaaggagaac
aagacctacggcgcgaccacgctcctgaagcgccacatgacgctgtcgggcgagtcgatc
atgctgcgctttgtcgccaagggcggcagacgcgtccagcacacgctgaagcatccccgt
ctgcagcgcatcctggaagaaatcgccgaccttccgggccggcagctattttcctggccg
gacgagcagggcgtgccgcatccgatcgattcgggccggctcaacgcctatctcgccgag
gtcgcagggttcgccgtctcggccaagacattccgcacctggggcggcagtctcgctgcc
ttgatggcagcctgggaggtggcggaggagggcgggcgaccgaagatcaaggcgatgtgc
aaggcagctgcggaagttctgcacaatacgccggcggtctgccgctcaagttacatccac
ccgagcattctcgcactctcggaggatgtctcgccgctggaaaaggtgatgagggataag
gcggcgctgacgcggccgaaggagttgcgcgtcaacgaacggcggcttctcgcttttcta
aaggaagtctag
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