Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141: RG1141_CH34350
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Entry
RG1141_CH34350 CDS
T03208
Symbol
yddS
Name
(GenBank) Putative ABC transporter periplasmic-binding protein YddS
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ngl
Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
Pathway
ngl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ngl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RG1141_CH34350 (yddS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ngl02000
]
RG1141_CH34350 (yddS)
Transporters [BR:
ngl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RG1141_CH34350 (yddS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF5818
Motif
Other DBs
NCBI-ProteinID:
CDN55770
UniProt:
A0A068TEF8
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Position
3463538..3465130
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AA seq
530 aa
AA seq
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MFGKTLRNVAVAGLLASSILASPAGAFERTDKGNVIVFGGRQAIPVLDPHIRYDWSTRMI
QQSVYDALVKYEGNPAEIKSWLAEKWETSADGKSWTFHLAKNAKFHNGDPVTAEAVRYSF
ERGLKLNKGVAWMLKDFLAPENIVAVDANTVRFDLKAPYAPFLSFLPWWFVVNPAEVKAH
EVDGDYGQKWLTDHAAGSGPFKLGRWEPNVLYEIEANDTYWKGWPQGEKNRPAGVIYKII
REPAAQKAALQRGEADIVEGLTPDDYIQIKRVPGVVIQDHKGMTTFGIKFNTQKGPTADI
NLRKAIAYALDYDALIQIYNGAASLETSPLPDAMKGHVAVPGMPRKDLAKAKEYLAKSAY
PNGGITLPYVHVAGLEEARRIGLVLLDNLKELGITVEVKPEQWPNMVAAGSKVETSPAMT
SVFTTPVSTDPDAVAYQYHKASWGQYYAMMFYDNPKVSEMIDQARAATNWDDRAKLYADI
QKQIVADQPEVFGMLQNRRWAHRDYLQGFQFSPVRFTGEVDLYPMWVKAE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgttcggaaaaaccttgagaaacgtcgcggtcgcggggctgctcgcctcctcgatccta
gcctcgcccgccggcgccttcgagcgcaccgacaagggcaacgtcattgttttcggtggc
cgccaggcaatcccggtcctcgacccgcatatccgctacgactggtcgacgcgcatgatc
cagcaatcggtctacgacgctctggtcaagtacgaaggcaacccggccgagatcaagtcc
tggctcgccgagaagtgggaaaccagcgccgacggcaagagctggaccttccatctcgcc
aagaacgccaagttccacaacggcgatccggtgaccgccgaagccgtgcgttattccttc
gagcgcggcctgaagctcaacaagggcgtcgcctggatgctcaaggacttcctggcgccg
gagaacatcgtcgccgtcgacgccaacactgttcgcttcgacctcaaggcgccctatgca
ccgttcctctccttcctgccctggtggttcgtcgtcaacccggccgaggtgaaggcccac
gaggtggacggcgactacggccagaagtggctgaccgaccatgcagccggttccggcccc
ttcaagctcggccgctgggaaccgaacgttctttatgaaatcgaagccaatgacacctac
tggaagggctggccgcagggcgaaaagaaccgcccggccggcgtcatctacaagatcatc
cgcgaacccgccgcccagaaggccgccctgcagcgcggcgaagccgacatcgtcgaagga
ctgacgccggacgactacatccagatcaagcgcgtgccgggcgtggtcatccaggaccat
aagggcatgaccaccttcggcatcaagttcaacacccagaaaggcccgaccgccgacatc
aacctgcgcaaggcgatcgcctatgcgctcgactacgatgcgctgatccagatctacaac
ggcgccgcctcgctcgagaccagcccgctgccggacgccatgaagggccatgtcgccgtt
cccggcatgccgcgcaaggatcttgccaaggccaaggaatatctggcgaaatcagcctat
ccgaacggcggcatcaccctgccctacgtccatgtcgccggcctcgaagaagcccgccgc
atcggcctagtgctgctcgacaacctgaaggaactcggcatcaccgtcgaggtcaagccg
gaacagtggccgaacatggtcgccgccggttccaaggtcgagacttcgccggccatgacc
tccgtgttcaccaccccggtctcgaccgaccctgacgcggtcgcctaccagtaccacaag
gcgagctggggccagtattacgcgatgatgttctacgacaatccgaaggtttcggagatg
atcgaccaggcccgcgccgccaccaactgggacgaccgcgccaagctttatgccgacatc
cagaagcagatcgtcgccgaccagccggaagtcttcggcatgctgcagaaccgccgctgg
gcgcatcgcgactatctgcagggcttccagttcagcccggtccgcttcaccggcgaggtc
gatctctacccgatgtgggtgaaggccgaatag
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