Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141: RG1141_CH40110
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Entry
RG1141_CH40110 CDS
T03208
Symbol
addB
Name
(GenBank) Double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ngl
Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
Brite
KEGG Orthology (KO) [BR:
ngl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngl03400
]
RG1141_CH40110 (addB)
Enzymes [BR:
ngl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RG1141_CH40110 (addB)
DNA repair and recombination proteins [BR:
ngl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RG1141_CH40110 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CDN56331
UniProt:
A0A068TE66
LinkDB
All DBs
Position
complement(4087885..4091088)
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AA seq
1067 aa
AA seq
DB search
MTTLSGKKRVFSIPAGAPFLKTVAQTLCDGRLNETFRYDAADPLSLADVTIYVPTRRSAR
VLRSEFVDLLGGRSAILPVIRPLGETDDDSGYFDLVAPEEMDLALPIGGTARLLELGRLI
LAWRNQLPKIVLDVHSESPLVAPASPADAIWLARALAELIDAVETEERDWADLKKLDTGE
HALWWQLTAEFLSIASAFWPIRLEELRRSSPAKHQAAILRGEARRISSRDHKGPVIVAGS
TGSVPAAADLIAAISNLPNGTVVLPGLDLSMPADQWAMIGEEAFDGKPEPASRSHSQFGL
SRLLKKLGVMREDVEVLGEVPDDLAFRAEALSQALVPAKATDRWSTWRDSADPSLLAQAF
ADVSLIEASNEREEAVAIAIALRLALEQPGRQGGESQAALITPDRALARRVTAELSRFGL
LADDSAGSPLSGTPQGTLAQLLLEATLRPGDPVAIVALIKHPLMRLGLPAAELRSAVEAL
EILALRGGLGDMDISALEPLLEIQLAAQLEDRHAPRWRLSLPADAAGRARDLAHRLANAV
EPLASALVRRRPDGRGLTAKLTLSEWAERTGRALEAICIDERRDLAALWSGEAGERLAGL
LSEVIDTDGQMEADGPQWIDIVMALTTGEAVKPRSLSHPRIFIFGTLEARLQSVDTMILG
GLNEGSWPGQTVNNPFLSRTMKTDMGLEPPERRIGQLAHDFEMACGTRHLILSRSMRQGS
TPTVASRWLQRLLALGGRQFADDLRTRGHQYRDWASMIDAGENQPVARRPAPKPPADLHP
TKYSFSEVGRLRRDPYSIYARRILKLDPLAPFNRDPGASERGTLYHAIIDRYTREGHKPG
TPAAREAMRRITEELFDAEQLPTHIDRVWRPRFVEVARAFLDWEVERAPDIRRTMTEVGA
GWELEPAGIRVTGIADRIDIKGSGLADLIDYKTGLNPSVSQARALLDPQLGLEAAALRAG
AFKDAGPLTPDQLLYVRLRPGDRFREDKVNNEGSSATAKRQPKSAIDLADESIEQLTRFV
ITLRNGEAGFASRLVPMAQNDFGGEYDHLARVAEWSTADDEEAEADE
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgttatccggcaagaagcgggtgttttcgatccccgccggagcgccgttcctc
aagaccgtggcgcagacactctgcgacggccggctcaacgagaccttccgctatgatgcg
gccgatccactttcgctcgccgatgtgaccatctacgtgccgacgcgacggtctgcccgc
gtgctacgctcggaattcgtcgatctgctcggtggccgctcggcgatcctgccggtcatc
cggccgcttggtgaaaccgacgacgacagcggttatttcgatctcgtagcacctgaggag
atggacctggcgctgccgatcggcggcaccgcgcgcctgctcgaactcggccggctgatc
cttgcctggcgcaaccagcttccgaaaatcgtgctcgacgtgcactcggaatcaccgctc
gtcgcacccgccagcccagccgatgccatatggctcgcccgggcgctcgccgaactcatc
gacgcggtcgaaaccgaagaacgcgactgggctgatctcaagaagctcgataccggggaa
catgcgctctggtggcagctgaccgcggagttcctgtcgatcgccagtgccttctggcct
atccgcctcgaagaactacgccgttcttcgccggcaaaacaccaggcggcgatcctgcgc
ggcgaggcaaggcggatttcgtccagggatcacaagggaccggtgatcgtcgcgggttcg
accggctccgtgccggcggctgccgatctgatcgccgcgatctccaaccttccgaacggc
accgtcgtgctgccggggctcgatctttcgatgccggcggatcaatgggcgatgatcggc
gaagaggcctttgacggcaaacccgaacccgccagccgcagccattcgcagttcggcctg
tcacggctgcttaaaaaactcggcgtgatgcgggaagacgtggaagtcctcggcgaggtg
cccgacgatctcgccttccgcgccgaagcgctctcccaggcgctggtgcccgccaaggcg
acggaccgctggagcacctggcgggacagcgccgacccctccctcctggcccaggccttt
gccgatgtctcgctgatcgaagcctcgaacgaacgcgaggaggctgtcgcaatcgccatc
gcgcttcggctggcactcgaacagccgggcaggcaaggcggcgagagccaggcggcactg
atcacacccgatcgtgcgcttgcccgccgggtcaccgccgagctttcccgtttcggcctg
ctcgccgacgattccgccggttcgccgctgtccggcacgccgcagggcacgctggcccag
cttctgctcgaagcgacgcttcggccgggcgaccccgtggcgatcgtcgcgctgatcaag
cacccgctgatgcgcctcggcctgccggcagcggagctgcgatcggccgtcgaagcgctc
gaaatcctggcgctgcgcggcggcctcggcgacatggacatttcggcgttggagccgttg
ctggaaatccagcttgccgcccagctcgaagacaggcatgcgccacgctggcggctatcg
ctgccggccgatgccgccggtagggcgcgcgatcttgcgcatcggctggcgaatgcggtc
gagccgctcgcctccgccctcgtccgccgccggccggatgggcgcggccttacggcaaaa
ctcacgctatccgaatgggccgaacgcaccggccgcgcgcttgaagcgatctgcatcgat
gaacggcgggatcttgcggccctctggtctggcgaggctggcgaacggctggccgggctg
ctctccgaagtcatcgataccgacgggcagatggaggcggacggtccgcagtggatcgat
atcgtcatggcgctgacaacaggcgaggcggtaaagccccgttcgctgagccatccgcgc
atcttcatcttcggcacgctcgaagcccggctgcagagcgtcgatacgatgatcctcggc
gggctcaacgaaggatcctggccggggcagacggtcaacaacccgttcctgtcccgcacc
atgaagaccgatatgggcctggaaccgccggaacgccggatcggccagcttgcccacgat
ttcgagatggcctgtgggacgcggcatctgatcctttcgcgctcgatgcgccaaggatcg
acgccgacggtcgcctcgcgctggctgcagaggctgcttgcgctgggtggacggcagttt
gcggacgacctccggacgcgcggccatcagtaccgcgattgggcttcgatgatcgatgcc
ggcgaaaaccagccggtcgccagacgcccggccccgaagccgccggcggatctgcacccg
acgaaatattccttcagcgaggtcgggcgcctgcgccgtgacccgtattcgatctatgcc
cgccgtatcctgaagctcgatccgctcgctccgttcaaccgcgatcccggcgcctccgaa
cgcggcacgctctatcatgcaatcatcgaccgctacacccgtgaaggccataaacccggt
acgcctgccgcaagggaagcgatgcgccggattaccgaggaattgttcgacgccgaacag
ctgccaacccatatcgaccgcgtctggcggccccggtttgtcgaagtcgcccgtgccttc
ctggattgggaagttgagcgggcgccggatatccgcaggacgatgacggaagtcggcgcc
ggctgggagctggagccagccggtatccgcgtcactggtatcgcggaccggatcgatatc
aagggatcgggtctcgccgatctcatcgactacaagaccggtctcaacccgtcggtatcc
caggctcgggcgctgctcgatccgcagctcgggcttgaggcggcagcgctcagagccgga
gctttcaaggatgcggggccattgacgcccgaccagctgctctatgtccggctgcgtccc
ggcgaccggttccgggaagacaaagtcaacaacgagggttcgagcgcgacggccaagcgg
caaccgaaatcggcgatcgatctggccgacgaatcgatcgaacagctcacccgcttcgtg
atcacgctgcgcaatggcgaagccggcttcgcatcgcggctcgtgccgatggcccagaat
gatttcggcggcgaatacgaccatctcgcgcgcgtcgccgaatggtcgacggccgacgac
gaggaggcggaagccgatgagtga
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