Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141: RG1141_CH42820
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Entry
RG1141_CH42820 CDS
T03208
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ngl
Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
Pathway
ngl03030
DNA replication
ngl03410
Base excision repair
ngl03420
Nucleotide excision repair
ngl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RG1141_CH42820
03410 Base excision repair
RG1141_CH42820
03420 Nucleotide excision repair
RG1141_CH42820
03440 Homologous recombination
RG1141_CH42820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngl03032
]
RG1141_CH42820
03400 DNA repair and recombination proteins [BR:
ngl03400
]
RG1141_CH42820
Enzymes [BR:
ngl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RG1141_CH42820
DNA replication proteins [BR:
ngl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RG1141_CH42820
DNA repair and recombination proteins [BR:
ngl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RG1141_CH42820
NER (nucleotide excision repair)
GGR (global genome repair) factors
RG1141_CH42820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
NYN_YacP
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
CDN56595
UniProt:
A0A068TGL1
LinkDB
All DBs
Position
4374304..4377318
Genome browser
AA seq
1004 aa
AA seq
DB search
MPHAIPCAMKKGDHLFLIDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKLLTDA
RDTSVGVTPSHFAVIFDYSSKTFRKDLYDAYKANRSAPPEELIPQFGLIRQATRAFNLPC
IETEGFEADDIIATYARQAEATGADVTIVSSDKDLMQLVTPNVHMYDSMKDKQIGIPDVI
EKWGVPPEKMIDLQAMVGDSVDNVPGIPGIGPKTAAQLLEEFGDLDTLLARAGEIKQVKR
RENIVANADLARLSRRLVSLRLDVPLDLDLDALVLEPQDGPKLVGFLKTMEFGTLTRRVA
AACNCDADAIEPAVVNVEWGQAARGPDLDAGGAAAVDTGEAAAEAPPHPAKAPVAKGMEA
ATPTALAEARIEAFAKAKLDPSCYVTIRDLTVLDDWIRAAQETGLVAFDTETTSLDPMQA
ELVGFSLALADNIANPSGLEVRAAYVPLIHKTGVGDLLGGGLVENQISTREALARLKPLL
EDPSVLKVAQNLKFDYLLMRRHGITVEGYDDTMLMSYVLEAGKANHGMDALSERWLNHKP
ITFKEVAGSGKAGVTFDFVDIDKATAYAAEDADVTLRLWMVLKPQLAAAGLTRIYERLER
PLVSVLARMEERGITIDRQILSRLSGELAQRAAAFEDEIYELAGEKFTIGSPKQLGDILF
GKMGLPGGAKTKTGQWSTSASVLEDLAAEGHPLPRKIVDWRQLTKLKSTYTDALPGYVHP
ETKRVHTCYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLVSADYSQIE
LRVLAHVADIPQLRQAFADGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISA
FGLANQLSIERSEAGDYIKKYFERFPGIRDYMESTKTFARENGYVETIFGRRAHYPEIKS
SNPSVRAFNERASINAPIQGSAADIIRRAMAKMESALQTAGLNGKARMLLQVHDELIFEV
EDEEIGQTLPVIISTMEHAAMPAISMRVPLKVDARAASNWDEAH
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgccccacgctattccttgcgccatgaaaaaaggcgatcatcttttccttatcgacggt
tccggcttcattttccgcgccttccacgcgttgccgccgctcacccgcaaatccgacggc
ctgccggtcggcgccgtctccggcttctgcaacatgttgtggaagctgctgaccgacgcg
cgcgacacctcggtcggcgtgacgcccagccatttcgcggtcatcttcgactattcctcc
aagaccttccgcaaggatctctacgacgcctacaaggcgaaccgctcggcgccgccggaa
gagctgatcccgcagttcggcctgatccgccaggcgacccgcgcattcaacctgccctgc
atcgagaccgaaggtttcgaagcggacgacatcatcgcgacctacgcccgccaggcggag
gcgaccggcgccgatgtgacgatcgtctcgtccgacaaggacctgatgcagctcgtgacg
ccgaacgtccacatgtacgatagcatgaaggacaagcagatcggcattccggacgtcatc
gagaaatggggcgtcccgccggagaagatgatcgacctgcaggcgatggtcggcgattcg
gttgacaacgtgccgggcattccgggcataggcccgaagacggcagcccagcttctcgaa
gagttcggcgatctcgacacgctgctcgcccgcgccggcgaaatcaagcaggtgaagcgc
cgcgaaaacatcgtcgccaatgccgatctcgcccgcctttcgcgccggctcgtctcgctg
cgtctcgatgtgcccttggaccttgatctcgacgcgctggtgctggagccgcaggacggc
ccgaaactggtaggcttcctgaaaaccatggaattcggcacgctgacgcgccgcgtcgcc
gctgcctgcaattgcgatgccgatgccatcgaacccgccgtcgtgaacgtcgaatggggt
caggccgctcgcggcccggatctcgatgccggcggtgcggcagcggtcgacaccggcgag
gcagcggccgaagcgccgcctcatccggccaaggcgccggtcgccaagggcatggaggcg
gcaacgccgaccgcactcgctgaggcccgcatcgaagcctttgccaaggccaagctcgat
ccgagctgctacgtgaccatccgggacctgacggtgctcgacgactggatccgcgcggcg
caggaaaccggccttgtcgccttcgatacggaaaccacgtcgcttgatccgatgcaggcg
gaactggttggtttttcgctggcgcttgccgacaatatcgccaacccgtccggcctagaa
gtccgcgcggcctatgtgccgctgatccacaagaccggcgtcggcgatctgctcggcggc
gggcttgtcgaaaaccagatctcgaccagggaagcgctggcgcgtctgaagccgctgctg
gaggacccgtcggtcctcaaagtggcgcagaacctgaaattcgattacctattgatgagg
cgccacggcatcaccgtcgagggttatgacgatacgatgttgatgtcctatgtgctggag
gccggcaaggcgaaccacggcatggacgcactgtcggagcgctggctgaaccacaagccg
atcaccttcaaggaagtcgccggcagcggcaaggcgggcgtcactttcgatttcgtcgat
atcgacaaggcgaccgcctatgccgcggaagatgcggacgtgacgctgcgcctgtggatg
gtgctgaaaccgcagctggcggctgcgggcctgacccgcatctatgaacggctcgagcgg
ccgctggtctcggtgctcgcccgcatggaagagcgcggcatcaccatcgaccggcagatc
ctgtccaggctttcgggagagcttgcccagcgggccgccgccttcgaagacgagatctac
gagctggcaggggaaaagttcaccatcggctcgccgaaacagctcggcgacatcctgttc
ggcaagatgggcctgccgggcggcgccaagaccaagaccggccaatggtcgacctcggcc
agcgtgctggaagacctggccgccgaaggtcatcccctgccgcgcaagatcgtcgactgg
cgccagctgacaaagctgaaatccacctacacggatgcgctgccgggttatgtccacccg
gagacgaagcgggtccacacctgctactcacttgcctccaccaccacaggccgactttcc
tcttcggaaccgaacctgcagaacatcccggtgcgtacggcggaaggccgcaagatccgc
accgcttttatctcgacgccgggccacaagctggtttccgccgactacagccagatcgag
ctgcgcgtgcttgcgcatgtggccgacattccgcaactgcgccaggcctttgccgatggg
atcgacattcatgcgatgacggcctcggaaatgttcggcgtgccggtcgagggcatgccg
agcgaagtgcgccgccgcgccaaggcgatcaacttcggcatcatctacggcatttccgcc
ttcggactggccaaccagctgtcgatcgaacgctcggaagcgggcgattacatcaagaag
tatttcgagcgcttcccgggcatccgcgattacatggaaagcaccaagaccttcgcccgc
gagaacggttacgtcgagacgatcttcggccgccgggcgcattatcccgagatcaagtcc
tccaacccttcggtgcgcgccttcaacgaacgtgcgtcgatcaatgcgccgatccagggt
tcggccgcagatatcatccgcagggcgatggcgaagatggaatcggcgctccaaacggcc
ggactgaacggaaaggcccgcatgctgctgcaggtgcacgacgaactgatcttcgaagtc
gaggacgaagagatcggccagaccttgccggtgatcatctcgaccatggagcacgcggcc
atgcccgcgatctcgatgcgggtgccgctgaaggtcgatgctcgcgccgccagcaattgg
gacgaggcccattga
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