Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141: RG1141_PA03170
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Entry
RG1141_PA03170 CDS
T03208
Symbol
rafR
Name
(GenBank) HTH-type transcriptional regulator RafR
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ngl
Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141
Brite
KEGG Orthology (KO) [BR:
ngl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngl03000
]
RG1141_PA03170 (rafR)
Transcription factors [BR:
ngl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RG1141_PA03170 (rafR)
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_24
Motif
Other DBs
NCBI-ProteinID:
CDN57152
UniProt:
A0A068TF94
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Position
pHAMBI1141a:complement(316574..317584)
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AA seq
336 aa
AA seq
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MANLKQLAHSLGLSITTVSRALDGYSDVSAATRERVREAAEAAGYRPNASARRLRKQRAE
LVAVTLPSDPGHVGPPHFLDMLSGCAEHLAAAGLNLVIAPVPRGVSELEICQRFVDGRRV
DAMLLVRTKRQDERVEYLQSRGIPFVTNGRTESQIPHPFIDGDGFAGFRAATLRFHAAGH
RRIGHIAGPQEYYFAHVRRRGWQAAMEECGLAADLCAEGAPLEQGGYLAALELLRQPSRP
TALVCATDEMAIGALRALREVDGGNQISIVGHDDLSMGAFTSPPLSTMRMTGENLGATFA
SLLLRAIAGEPAEDLQELHAIEFVDRDSHRRPPVAA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaatctgaaacagctggcacattcgctcggactgtcgattaccactgtgtcccga
gcacttgatggctattccgacgtgtccgcggccacccgcgagcgggttcgcgaggcggca
gaggccgcaggttatcggccgaatgcctccgctcgtcggttgcgcaagcagcgcgctgag
ctggtcgccgtgacgctgccgagtgaccctggccacgtcggccctcctcatttcctcgac
atgttgtcgggctgcgccgaacatctcgccgcggccggtctcaatctcgtcatcgcgcct
gtgccgcggggtgtcagcgaacttgaaatatgccagcgcttcgtcgatgggcgccgcgtc
gacgccatgctgctggtccgcaccaaacgccaggacgagcgcgtcgaatacctccagtcg
cggggcattcccttcgtcaccaacggccgcaccgaaagccagatcccccatccgttcatc
gacggcgatggttttgccgggttccgcgccgcaacgctgcgcttccatgcagcggggcat
cggcgcatcggccatatcgccgggccgcaggaatattacttcgcgcatgtccgtcgccgc
ggttggcaggcggcgatggaggagtgcgggcttgcggccgatctctgcgccgaaggagcg
ccgctcgaacagggcggttatctcgcagccctggaactgctgcgccagccgtcgcgtccg
acggcccttgtctgcgccaccgacgaaatggcgatcggcgcgttgcgggcactgcgcgag
gtcgacggcggcaaccagatcagcatcgtggggcatgacgacctgtcgatgggcgccttc
accagcccgccgctctcgaccatgcgcatgaccggcgagaacctcggcgcgaccttcgcc
tcgttgctcctgcgcgccatcgccggagagcccgccgaagaccttcaggagcttcacgcg
atcgaatttgtcgaccgcgacagccaccgccgcccaccggtggccgcatag
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