Nonomuraea gerenzanensis: LCN96_01585
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Entry
LCN96_01585 CDS
T07782
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ngn
Nonomuraea gerenzanensis
Pathway
ngn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCN96_01585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngn03019
]
LCN96_01585
03400 DNA repair and recombination proteins [BR:
ngn03400
]
LCN96_01585
Enzymes [BR:
ngn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCN96_01585
Messenger RNA biogenesis [BR:
ngn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LCN96_01585
DNA repair and recombination proteins [BR:
ngn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LCN96_01585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
PcrA_UvrD_tudor
AAA_30
MarR_2
MarR
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
UBU13758
LinkDB
All DBs
Position
307505..309154
Genome browser
AA seq
549 aa
AA seq
DB search
MGLWTGLRGRFGRRGRRLRATARQRFGWQALRPGQQEAMEHLLAGRDVLLVMPTGGGKSA
VYQLPALLLDGPAIVVSPLIALQRDQVSGLAEADAGGAVAVNSTASVEAGLEKVTAGDAA
FVFLSPEQLAKAEVVERLARARPSLIAIDEAHCVSSWGHDFRPDYLRLGQVIERLGHPPV
VAMTATAAPNVREEIVRSLGLTRPAEIVRGFDRPNLFLEVRRFARAEDKSRALVEDAASR
DGLGLVYVATRKESEEYAAALAGRGRRAEAYHGGMRAAERTRVHDLFTRGEVDTVVATSA
FGMGIDRPDVRHVLHAAPPESPDAYYQEIGRAGRDGGPAAAVLFYRQEDLGLRRFFTAGR
ADGEALLRVATLVREHGGTVPAGELAALLKVGTTQLTRLVNLLEQAGALTVTATGDLRYT
DAGLPPERAAARAAELDETRRRVDDSRIDMMRGYAETRGCRRRFLLAYFGEPYAPVTCGA
CDTCESGDAPEPVPAPGRGEFPVQAKVTHKLWGPGTVMSREHDRITVLFDSVGYKTLSLA
VVADVLRRA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgggcttatggacggggctgcggggccggttcgggcggcgcgggcgcaggctgcgggcc
acggccaggcagcgcttcggctggcaggcgctgcggccgggccagcaggaggcgatggag
cacctgctcgccggccgcgacgtgctgctcgtcatgccgacgggcggcggcaagtcggcg
gtctaccagttgcccgcgctgctgctcgacgggcccgcgatcgtcgtctcgccgctgatc
gcgctccagcgtgaccaggtgagcggcctggccgaggcggacgcgggcggcgccgtggcg
gtgaactccaccgcctccgtggaggcggggctggagaaggtcacggcgggggacgcggcg
ttcgtgttcctgtcgccggagcagctcgccaaggccgaggtggtcgaacggctcgcgcgg
gcacggccgtcgctgatcgcgatcgacgaggcgcactgcgtctcgtcgtgggggcacgac
ttccgccccgactacctgcggctgggccaggtcatcgagcgtctggggcatccgccggtg
gtggccatgaccgccaccgccgcgccgaacgtccgcgaggagatcgtccgctcgctcggg
ctgaccaggccggccgagatcgtcaggggcttcgaccgccccaacctcttcctggaggtc
cgccgcttcgcccgcgcggaggacaagagccgggccctggtcgaggacgccgcctcccgc
gacgggctcggcctcgtctacgtcgccacccgcaaggagagcgaggagtacgccgcggcg
ctggccggcaggggacgccgggccgaggcgtaccacgggggcatgcgcgccgccgagcgc
acccgcgtgcacgacctgttcacccggggggaggtggacacggtcgtggcgacgtcggcg
ttcggcatgggcatcgaccggccggacgtgcgtcacgtgctgcacgccgcgccgccggag
tcacccgacgcgtactaccaggagatcggcagggcgggccgggacggcgggccggccgcg
gccgtgctgttctaccggcaggaggacctgggcctgcgccgcttcttcaccgccggcagg
gccgacggcgaggcgctgctgcgcgtggcgacgctcgtgcgcgagcacggcggcacggtg
cccgccggcgagctggccgcgctgctcaaggtgggcaccacccagctcaccaggctggtc
aacctgctggagcaggcgggcgcgctcaccgtgaccgccaccggcgacctgcgttacacc
gacgcggggctgccgccggagcgggccgccgcgcgggcggccgagctggacgagacgcgg
cgccgcgtcgacgactcgcgcatcgacatgatgcgcggctacgcggagaccaggggctgc
cgccgccggttcctgctcgcctacttcggcgagccgtacgcccccgtcacctgcggcgcg
tgcgacacctgcgagagcggcgacgcgcccgagccggtgcccgcgcccgggcggggcgag
ttccccgtgcaggcgaaggtgacgcacaagctgtgggggcctgggacggtcatgagccgg
gagcacgacaggatcaccgtgctgttcgactcggtgggctacaagacgctctcgctggcc
gtggtggcggacgtgctgcgccgcgcgtag
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