Nonomuraea gerenzanensis: LCN96_04320
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Entry
LCN96_04320 CDS
T07782
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ngn
Nonomuraea gerenzanensis
Pathway
ngn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCN96_04320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngn03400
]
LCN96_04320
Enzymes [BR:
ngn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LCN96_04320
DNA repair and recombination proteins [BR:
ngn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCN96_04320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UBU14260
LinkDB
All DBs
Position
complement(839311..839928)
Genome browser
AA seq
205 aa
AA seq
DB search
MVKDGNNGAAEFLPDRLDLDALRRAAAGCEGCDLYRNATQTVFGEGPRQARFMLVGEQPG
DQEDRQGHPFVGPAGRILDRGLQEAGIEREDVYLTNAVKHFSFTPRGKRRIHQKPTAAEI
GACQPWLNAELAVVRPEVVVVLGATAARSLLGRAFKVTQHRGEAVPLGEALAVATIHPSA
VLRAPDRDAAYAGFLADLQAAARVA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggttaaggacggcaacaatggggcggccgagttccttcccgaccgtctcgatcttgac
gcgctgcggcgtgccgcggccggctgcgagggctgtgacctgtacaggaacgccacgcag
acggtgttcggcgaggggccgcggcaggccaggttcatgctcgtcggcgagcagccgggc
gatcaggaggatcggcaggggcatccgttcgtcggccctgcggggcgcattctggacaga
gggttgcaagaggcggggatcgagcgtgaggacgtctacctcaccaacgccgtcaagcac
ttctctttcacgccacggggtaaaagacggattcatcagaaacccacggccgcggagatc
ggcgcctgccagccgtggctgaacgcggagctggccgtggtgcggcccgaggtggtcgtg
gtgctcggcgcgacggcggcgcggtcgctgctggggcgcgcgttcaaggtgacgcagcac
cgcggtgaggcggtgccgctcggcgaggcgctggcggtggcgaccatccatccctccgcg
gtgctgcgggcgcccgacagggacgcggcgtacgcgggcttcctggccgacctccaggcg
gctgcgcgggtcgcctga
DBGET
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