Nonomuraea gerenzanensis: LCN96_05015
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Entry
LCN96_05015 CDS
T07782
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ngn
Nonomuraea gerenzanensis
Pathway
ngn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCN96_05015 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngn03019
]
LCN96_05015 (groL)
03110 Chaperones and folding catalysts [BR:
ngn03110
]
LCN96_05015 (groL)
03029 Mitochondrial biogenesis [BR:
ngn03029
]
LCN96_05015 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngn04147
]
LCN96_05015 (groL)
Enzymes [BR:
ngn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LCN96_05015 (groL)
Messenger RNA biogenesis [BR:
ngn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LCN96_05015 (groL)
Chaperones and folding catalysts [BR:
ngn03110
]
Heat shock proteins
HSP60 / Chaperonin
LCN96_05015 (groL)
Mitochondrial biogenesis [BR:
ngn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LCN96_05015 (groL)
Exosome [BR:
ngn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LCN96_05015 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LCN96_05015 (groL)
Exosomal proteins of breast cancer cells
LCN96_05015 (groL)
Exosomal proteins of colorectal cancer cells
LCN96_05015 (groL)
Exosomal proteins of bladder cancer cells
LCN96_05015 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UBU14388
LinkDB
All DBs
Position
958454..960073
Genome browser
AA seq
539 aa
AA seq
DB search
MAKILEFDENARRALERGVNALADAVKVTLGPRGRNVVIDKKFGAPTITNDGVTIAREIE
LEERYENLGAQLAKEVATKTNDIAGDGTTTATVLAQAMVREGLRNVAAGASPLSLKRGID
KAAKAVSDKLLASAREVGDKKEIANVATISAQDAQIGGLIAEAFDKVGKDGVLTVEESNA
MGMELEFTEGMQFDKGYLSAYMVTDPERMESVLEDAYILLTQGKISSIADFLPLLEKIAQ
TKKPLLVVAEDVEGEALAVLVTNKIRGTFTSVAVKAPGFGDRRKAMLQDMAILTGGQVVS
EEVGLKLEHVGLEVLGTARRVVVTKDATTIVDGAGDAQAIEDRVKEIKIAIEQSDSDWDR
EKLQERLAKLAGGVCVLRVGAATEVELKEKKHRLEDAISATRAAIEEGIVSGGGSALIHI
GKDLDDLGLTGDEATGVGIVRRALVEPARWIAENAGLEGYVVTHKVAELEAGHGLNAATG
EYVNLLDQGVIDPVKVTRSAVQNAASIAGMLLTTEALVVDKPEEEAPAAGQGHGHGHGH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctggagttcgacgagaacgcccgccgcgctctcgagcgtggcgtgaac
gccctcgcggacgccgtgaaggtaaccctcggcccgcgtggccgcaacgtcgtcatcgac
aagaagttcggtgctccgacgatcacgaacgacggtgtgaccatcgctcgtgagatcgag
ctggaggagcgctacgagaacctcggcgcccagctcgccaaggaagttgccaccaagacc
aacgacatcgcgggtgacggcaccaccaccgcgaccgtcctggcccaggccatggtccgc
gagggcctgcgcaacgtggccgccggcgcctcgccgctgtcgctcaagcgcggcatcgac
aaggccgccaaggccgtcagcgacaagctgctggccagcgcccgcgaggtcggcgacaag
aaggagatcgccaacgtcgccacgatctccgcgcaggacgcccagatcggcggcctgatc
gccgaggcgttcgacaaggtgggcaaggacggtgtcctcaccgtcgaagagtccaacgcc
atgggcatggagctcgagttcaccgagggcatgcagttcgacaagggctacctgtcggcc
tacatggtgaccgaccccgagcggatggagtccgtcctcgaggacgcctacatcctgctc
acccagggcaagatctcctccatcgcggacttcctgccgctgctggagaagatcgcccag
acgaagaagccgctcctcgtggtcgccgaggacgtcgagggcgaggccctggccgtcctg
gtcaccaacaagatccgcggcaccttcacctccgtggccgtcaaggccccgggcttcggc
gaccgccgcaaggcgatgctgcaggacatggccatcctcaccggcggccaggtcgtcagc
gaggaggtcggcctcaagctggagcacgtcggtctcgaggtgctcggcacggcccgccgc
gtcgtcgtcaccaaggacgccacgaccatcgtcgacggcgccggtgacgcgcaggccatc
gaggaccgcgtcaaggagatcaagattgccatcgagcagtccgactccgactgggaccgc
gagaagctgcaggagcgcctggccaagctcgccggcggtgtgtgcgtgctgcgcgtcggc
gccgccaccgaggtggagctgaaggagaagaagcaccgcctcgaggacgcgatctccgcg
acgcgcgccgccatcgaggagggcatcgtctccggcggtggctccgcgctgatccacatc
ggcaaggacctcgacgacctcggcctcacgggcgacgaggccaccggtgtcggcatcgtg
cgccgcgcgctggtcgagccggcccgctggatcgccgagaacgccggtctcgagggctac
gtggtgacgcacaaggtggccgagctggaggccggtcacggtctcaacgccgccaccggc
gagtacgtgaacctgctcgaccagggcgtcatcgacccggtcaaggtcacgcgctcggcc
gtgcagaacgccgcttcgatcgcgggcatgctgctcaccaccgaggcgctcgtggtggac
aagcccgaggaggaggccccggccgccggccagggtcacggtcacggccacggccactga
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