Nonomuraea gerenzanensis: LCN96_11550
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Entry
LCN96_11550 CDS
T07782
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ngn
Nonomuraea gerenzanensis
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngn03009
]
LCN96_11550 (rimO)
Enzymes [BR:
ngn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LCN96_11550 (rimO)
Ribosome biogenesis [BR:
ngn03009
]
Prokaryotic type
ribosomal protein modification factors
LCN96_11550 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CdrL_M
Motif
Other DBs
NCBI-ProteinID:
UBU15622
LinkDB
All DBs
Position
2396828..2398240
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AA seq
470 aa
AA seq
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MSSRRTASLITLGCARNEVDSEELAARLEAAGWQLGDDDPDVVVVNTCGFIDSAKKDSID
TLLAAADSGAKVVAAGCMAERYGNELAEALPEASAVISFDDYAEIGDRLDDVLADRPLKP
HTPRDRRTLLPISPVDRASAPKANIPGHGDLPEGLAPASGPRVLRKRLDESPVASLKLAS
GCDRRCTFCAIPAFRGSYVSRRPDELLAEADWLAHRGVRELVLVSENSTSYGKDLGDLRA
LEKLLPQLAAVEGVERVRVSYLQPAELRPGLIDVITGTEGVAPYFDLSFQHASGGVLRRM
RRFGDPERFLGLLETVRERAPEAGVRSNFIVGFPGETEEEFGELVGFLEAARLDVIGVFG
YSDEDGTEAAKLPGKLDQEVIDERVRVLTELAEELTAQRAEERIGTEVDVLIDDDLGDGG
YEGRAAHQGPEVDGSVTVQGIGLVKGQIVRAHVVDAEGVDLIARIKAGGP
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccgccgaaccgcatcgctgatcactctgggctgcgcacgcaacgaggtcgac
tccgaagagctggccgcgcgactggaggctgccggctggcagctgggcgacgacgacccc
gatgtcgtcgtcgtcaacacgtgtggcttcatcgactcggccaagaaggactccatcgac
acgctgctggccgccgccgactccggcgcgaaggtggtcgccgcgggttgcatggccgag
cgctacggcaacgagctcgccgaggccctgcccgaggccagcgcggtcatctccttcgac
gactacgccgagatcggtgaccgcctcgacgacgtgctggccgacaggccgctcaagccg
cacacgccacgcgaccgccgcaccttgctacccatctcgccggtggaccgtgccagcgcc
cccaaggccaacatcccaggtcacggcgacctgcctgagggcctggcgcccgccagcggg
ccgcgcgtgctgcgcaaacggctcgacgagagcccggtggcctcgctcaagctggcctcc
ggctgcgaccgccgctgcacgttctgcgccatcccggccttccgtggctcctacgtctcc
cgccggcccgacgagctgctcgccgaggccgactggctggcccacaggggcgtgcgcgag
ctcgtcctggtcagcgagaactccacctcctacggcaaggacctgggcgacctcagggcg
ctggagaagctgctgccgcagctggccgccgtggagggcgtcgagcgggtgcgggtcagc
tacctgcagcccgccgagctgcgtcccggcctgatcgacgtgatcaccggcaccgagggc
gtcgcgccctacttcgacctgtccttccagcacgccagcggcggcgtgctgcgccggatg
cggcgcttcggcgaccccgagcgcttcctggggctgctggagaccgtgcgcgagcgcgcc
cccgaggcgggcgtgcgctccaacttcatcgtgggcttccccggggagaccgaggaggag
ttcggcgagctggtcgggttcctggaagcggccaggctcgacgtgatcggcgtgttcggc
tactccgacgaggacggcacggaggcggccaagctgccgggcaagctggatcaggaggtc
atcgacgagcgggtgcgggtgctcaccgagctggccgaggagctgacggcccagcgggcg
gaggagcgcatcggcaccgaggtcgacgtgctgatcgacgacgacctgggcgacggcggc
tacgagggccgcgcggcgcaccagggccccgaggtcgacggctcggtcacggtgcagggc
atcggcctggtcaaggggcagatcgtacgcgcgcacgtggtcgacgccgagggggttgac
ctgatcgcgcgcatcaaggccggcggtccatga
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