Nonomuraea gerenzanensis: LCN96_19340
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Entry
LCN96_19340 CDS
T07782
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ngn
Nonomuraea gerenzanensis
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngn03021
]
LCN96_19340
Transcription machinery [BR:
ngn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LCN96_19340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_10
MarR
DUF7343
HTH_28
HTH_23
HTH_Tnp_4
Sigma70_ECF
HTH_24
HTH_3
HTH_Crp_2
MarR_2
GerE
HTH_AraC
IF2_N
HTH_5
HTH_37
KORA
Motif
Other DBs
NCBI-ProteinID:
UBU17089
LinkDB
All DBs
Position
4038798..4039568
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AA seq
256 aa
AA seq
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MAVQEYVLEEMTAEELLAEMAREETPDSHRERLRERIVEMHRPLAMEIARRYRYRGEPLE
DLLQAAYVGLMKAVNGFDPTLGHAFRGYAVVTMTGEVKRHFRDRTWAIRVPRLYQERRSE
LNRLVADLSQDLGRSPTVAELAAKMNISEEDVLLTLDASAAYSTLSLDAPLGTDDDAASL
GDVIPEDDDTLSNMVDREAVKPLIDALPSREKHILLLRFFGNMTQAEIAAEFGISQMHVS
RILRKVLDQLRTELVG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcaggaatacgtcctcgaggagatgaccgcggaagaactgctggccgagatg
gccagggaagagacgcccgacagccacagggaacgcctgcgtgagcgcatcgtcgagatg
caccggccgctcgccatggagatcgcccggcgctaccgctaccggggcgaacctttggaa
gatctcctccaggccgcgtatgttggcctgatgaaggccgtcaacggcttcgaccccacc
ctcgggcacgcgttccgcgggtatgcggtcgtcaccatgacgggtgaggtcaagcgccac
ttccgcgaccgcacctgggcgatccgggtgccccggctctaccaggagcgccgctccgag
ctcaaccggctcgtggccgacctcagccaggacctcggccggtcgccgaccgtggccgag
ctggccgcgaagatgaacatcagcgaggaggacgttctgctcacgctcgacgcctccgcc
gcgtacagcacactgtcgctcgacgcgccgctcggcaccgacgacgacgccgcctcgctc
ggcgacgtcatcccggaggacgacgacacgctgagcaacatggtcgacagggaagccgtc
aaaccgctcatcgacgcgctgccctcccgtgagaagcacatcctgttgctgcgcttcttc
ggcaacatgacgcaggccgagatcgcagccgagttcggaatctcccagatgcatgtttcg
cgtattctccgcaaggttctcgaccagcttcgcaccgagctggtcggctga
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