Nonomuraea gerenzanensis: LCN96_24340
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Entry
LCN96_24340 CDS
T07782
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ngn
Nonomuraea gerenzanensis
Pathway
ngn00521
Streptomycin biosynthesis
ngn00523
Polyketide sugar unit biosynthesis
ngn00525
Acarbose and validamycin biosynthesis
ngn00541
Biosynthesis of various nucleotide sugars
ngn01055
Biosynthesis of vancomycin group antibiotics
ngn01100
Metabolic pathways
ngn01110
Biosynthesis of secondary metabolites
ngn01250
Biosynthesis of nucleotide sugars
Module
ngn_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LCN96_24340 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LCN96_24340 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LCN96_24340 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LCN96_24340 (rfbB)
00525 Acarbose and validamycin biosynthesis
LCN96_24340 (rfbB)
Enzymes [BR:
ngn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LCN96_24340 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
NmrA
adh_short
Motif
Other DBs
NCBI-ProteinID:
UBU18037
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All DBs
Position
5185357..5186340
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AA seq
327 aa
AA seq
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MRILVTGGAGFIGSEFVRATLRDAPGTRVTVLDKLTYSGNLANLDPVAGHPGLRFVPGDT
ADPLVVDEVTAGQDVIVHFAAETHVDRSIISATDFVRTNVLGTQTLLEAALRHGVSRFVH
VSTDEVYGSIARGSWTEETPLAPNVPYAASKAGSDLLALAFHRTLGLDVVVTRCTNNYGH
YQFPEKVIPLFVTNLLEGRPVPLYGDGDNRRDWLHVSDHCRAIRLVLERGRAGEVYHIGG
GCELSNLELTALLLDACGADWDLVQHVPDRPGHDLRYSLDISKIQRELGYAPAVAFTDGL
AATVEWYRNNRSWWEPLKHRELAAAIR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgcggatcctggtcaccggcggtgccggtttcatcggctcggagttcgtcagagcgacg
ctgcgcgacgcgccgggcacccgggtcaccgtcctggacaagctcacctactccggcaac
ctggccaacctcgaccccgtagccggccaccccgggctgcgcttcgtgcccggcgacacc
gccgacccgctcgtcgtcgacgaggtgacggcgggccaggacgtcatcgtgcacttcgcc
gccgagacgcacgtggaccggtcgatcatcagcgccaccgacttcgtgcgcaccaacgtg
ctcggcacccagacgctgctggaggcggcgctgcggcacggcgtcagccgcttcgtgcac
gtctcgaccgacgaggtgtacggctccatcgcccgggggtcgtggaccgaggagacgccg
ctggcgccgaacgtgccctacgcggcctccaaggcgggctcggacctgctggccctggcc
ttccaccggacgctcggcctggacgtggtggtcacccggtgcaccaacaactacggccac
taccagttcccggagaaagtgatcccgctgttcgtgaccaacctgctggagggccgcccg
gtgccgctgtacggcgacggcgacaaccggcgcgactggctgcacgtctccgaccactgc
agggccatccgcctggtgctcgaacgcgggcgcgcgggcgaggtctaccacatcggcggc
ggctgcgagttgtccaacctggagctgaccgccctgctgctcgacgcgtgcggcgcggac
tgggacctggtccagcacgtgcccgaccgccccggccacgacctgcgctactccctggac
atctccaagatccagcgggagctgggctacgcgcccgcggtcgcgttcaccgacgggctg
gccgcgaccgtcgagtggtacaggaacaaccggtcctggtgggagccgctgaagcaccgc
gagctcgcggccgccatccgctga
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