Nonomuraea gerenzanensis: LCN96_27115
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Entry
LCN96_27115 CDS
T07782
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ngn
Nonomuraea gerenzanensis
Brite
KEGG Orthology (KO) [BR:
ngn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngn03400
]
LCN96_27115
DNA repair and recombination proteins [BR:
ngn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LCN96_27115
Archaeal homologous recombinant proteins
LCN96_27115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
ABC_tran
AAA_27
AAA_21
ABC_ATPase
AAA_15
RsgA_GTPase
AAA_5
MMR_HSR1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UBU18558
LinkDB
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Position
5795467..5798019
Genome browser
AA seq
850 aa
AA seq
DB search
MRPLKLHLDDFGSFREPVTADFSDVDYFVLVGPTGAGKSTLIDAICFALYGTVPRWGREN
VIAHALAPSAVAAKVALVFETGGRRYAVVRALKRDAKGKVHTAEARLEELVPSVPATAGL
EELMSAVARPLAEGAAVTAEVQRITGLEYRFFTQCVVLPQGRFAEFLHAQPRERQDLLVQ
LLDAEVYEQVRQRAVQEEGAAAQAATFARERLARLADADEAAEQAAEARLTSLRALDEQV
RGDLDTLRSTAEEIRRLAAERETARRRVAALTSLAMPAEVPTLAQTVRAAAAEVRAHAAD
AELAAAEEQRAEDELAALDDPGVLMDRLRTIEEHERVVTELRSVEERAARTRAGLEPLTE
RARALDTALAEAEEARDRLRDAHAGAELAARLVVGQQCPTCLRPVERLPHHPASADLRAA
ERHVKSCRKEAEQARTRRTEAETETRHLERAARDLAVRATRSGHAVAAFTGSGQAADAAP
AGAVLDLDGLRDDLEGRLAAVRAAERRAAKLRQAARDARARLATAQRRADELTGRTDRLW
RALEAARDTVVPLGAPPVDRADLHHAWTSLLTWRDDTAVRERAALDEQDGRVTGAERRAR
ELLSAVVARLSGHDVPVPGTAVTPAASESSTDADGGAVAARLGELVAAATAQAQARLARV
RENRATARELDERARTEEERARVAKELAQCLRADAFERWLCTEALDLLVTAASDTLRELS
DGQYELALGARNEIEVIDHAEAGLRRNARTLSGGETFQAALALALALSDQVAGLSATAAR
SLDSLFLDEGFGSLDPATLDTVATTLERLAGGRERMVGVVTHVPALADRIPVRFEVRRDA
KGSHLHKVTA
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccctgaagctccacctcgacgacttcggcagcttccgcgagcccgtcacggcc
gacttctccgacgtcgactacttcgtcctcgtcggcccgacgggcgcgggcaagagcacg
ctgatcgacgccatctgcttcgccctgtacggcaccgtgccgcgctggggcagggagaac
gtcatcgcccacgccctggccccgtccgccgtggccgccaaggtggcgctggtcttcgag
accgggggccgcaggtacgccgtcgtccgggcgctcaagcgcgacgccaagggcaaggtg
cacaccgccgaggcccgcctggaggagctcgtgccgtccgtcccggcgacggccgggctg
gaggagctgatgagcgccgtcgcccggccgctcgcggagggcgccgccgtcaccgccgag
gtccagcggatcaccggcctggagtaccggttcttcacccagtgcgtggtgctgccgcag
ggcaggttcgccgagttcctgcacgcccagccgcgcgaacgccaggacctgctcgtgcag
ctcctcgacgccgaggtctacgagcaggtcaggcagcgcgccgtccaggaggagggcgcc
gccgcgcaggccgccacgttcgcccgcgagcggctggcccgcctcgccgacgccgacgag
gccgccgaacaggcggccgaggcccggctgacctcgctccgcgccctggacgagcaggtc
aggggcgacctcgacaccctcaggagcacggcggaggagatccgccgcctcgccgcggag
cgggagaccgcccggcggcgggtggccgcgctgacctcgctcgccatgccggcggaggtg
cccacgctggcgcagaccgtccgcgcggcggcggcggaggtgcgcgcgcacgccgccgac
gccgagctggccgcggcggaggagcagcgggccgaggacgagctggccgcgctggacgat
cccggcgtgctcatggaccggctcaggacgatcgaggagcacgaacgcgtcgtcaccgag
ctgcgttccgtcgaggaacgggccgcccggacgcgagccggcctcgaaccgctcaccgaa
cgcgcccgcgccctcgacaccgcgctcgccgaggccgaggaggccagggaccggctgcgc
gacgcccacgcgggggccgagctggccgcccggctcgtcgtcggccagcagtgccccacc
tgcctgcggcccgtcgaacggctgccccaccatccggcttcggccgacctgcgggcagcg
gagcggcacgtcaagagctgccgcaaggaggccgagcaggcgcgcacccgccgcacggaa
gccgagaccgagacccgccacctcgaacgcgcggcccgtgacctggccgtacgcgccacc
cgcagcggccacgccgtggcggcgttcacgggctccggccaggcagccgacgccgctcct
gccggggcggtgctggacctcgacgggctgcgcgacgacctggaagggcggctcgcggcc
gtgcgggcggcggagcggcgggccgccaagctcaggcaggccgcccgcgacgcccgggcc
cggctcgccaccgcccagcggcgcgccgacgagctgaccggcaggaccgaccggctctgg
cgtgccctggaggccgcccgcgacacggtggtgccgctcggcgcgccgcccgtggaccgc
gccgacctccaccacgcctggacgagcctgctcacctggcgcgacgacaccgccgtccgg
gagcgggcggcgctggacgagcaggacggacgcgtcaccggtgctgagcgccgggcacgg
gagctgctctccgccgtcgtcgcccgcctgagcggccacgacgtgcccgtccccggaacc
gccgtgaccccggccgcctcggagagcagcaccgatgccgacggtggtgcggtggccgcg
cggctgggggagctggtggccgcggcgaccgcgcaggcgcaggcacgcctggccagggtc
agggagaaccgcgccaccgccagggagctggacgagcgcgccaggaccgaggaggagcgc
gccagggtggccaaggagctggcccagtgcctgcgcgccgacgcgttcgagcgctggctc
tgcaccgaggcgctcgacctgctggtcaccgccgcctccgacaccctgcgtgagctgtcc
gacggccagtacgagctggccctcggcgccaggaacgagatcgaggtcatcgaccacgcc
gaggcgggcctgcgccgcaacgcccgcaccctgtcgggcggcgagacgttccaggccgcg
ctcgccctggccctggccctgtctgaccaggtggcgggcctgtcggcgacggcggcgcgc
agcctcgactcgctcttcctcgacgagggcttcggcagcctcgacccggccaccctcgac
acggtcgccaccaccctcgaacggctggccggcgggcgcgagcgcatggtcggcgtggtc
acgcacgtgccggcgctggccgatcgcatcccggtgcgtttcgaggtccgccgcgacgcc
aagggctcgcacctgcacaaggtgacggcatga
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